Protein–RNA interactions for Protein: Q8CBY1

Samd4a, Protein Smaug homolog 1, mousemouse

Known RBP Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd4aQ8CBY1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samd4aQ8CBY1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Samd4aQ8CBY1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samd4aQ8CBY1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.08■□□□□ 0.81
Samd4aQ8CBY1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samd4aQ8CBY1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Samd4aQ8CBY1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Samd4aQ8CBY1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Samd4aQ8CBY1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samd4aQ8CBY1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samd4aQ8CBY1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samd4aQ8CBY1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Samd4aQ8CBY1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samd4aQ8CBY1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Samd4aQ8CBY1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Samd4aQ8CBY1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Samd4aQ8CBY1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Samd4aQ8CBY1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samd4aQ8CBY1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samd4aQ8CBY1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samd4aQ8CBY1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Samd4aQ8CBY1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samd4aQ8CBY1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Samd4aQ8CBY1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Samd4aQ8CBY1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Samd4aQ8CBY1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samd4aQ8CBY1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Gm7417-201ENSMUST00000192950 473 ntBASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Samd4aQ8CBY1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20■□□□□ 0.79
Samd4aQ8CBY1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samd4aQ8CBY1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samd4aQ8CBY1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samd4aQ8CBY1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samd4aQ8CBY1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.98■□□□□ 0.79
Samd4aQ8CBY1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.98■□□□□ 0.79
Samd4aQ8CBY1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.98■□□□□ 0.79
Samd4aQ8CBY1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.98■□□□□ 0.79
Samd4aQ8CBY1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms