Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc46a2Q8CA03 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc46a2Q8CA03 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.75
Slc46a2Q8CA03 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Slc46a2Q8CA03 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc46a2Q8CA03 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc46a2Q8CA03 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc46a2Q8CA03 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Slc46a2Q8CA03 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a2Q8CA03 Gm11687-201ENSMUST00000118911 886 ntBASIC19.75■□□□□ 0.75
Slc46a2Q8CA03 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.75■□□□□ 0.75
Slc46a2Q8CA03 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a2Q8CA03 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a2Q8CA03 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a2Q8CA03 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a2Q8CA03 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc46a2Q8CA03 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc46a2Q8CA03 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.74■□□□□ 0.75
Slc46a2Q8CA03 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc46a2Q8CA03 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slc46a2Q8CA03 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc46a2Q8CA03 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc46a2Q8CA03 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc46a2Q8CA03 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc46a2Q8CA03 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc46a2Q8CA03 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc46a2Q8CA03 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc46a2Q8CA03 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
Slc46a2Q8CA03 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Cap2-205ENSMUST00000225824 1634 ntBASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc46a2Q8CA03 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc46a2Q8CA03 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc46a2Q8CA03 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.69■□□□□ 0.74
Slc46a2Q8CA03 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc46a2Q8CA03 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc46a2Q8CA03 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc46a2Q8CA03 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc46a2Q8CA03 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc46a2Q8CA03 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.68■□□□□ 0.74
Slc46a2Q8CA03 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc46a2Q8CA03 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc46a2Q8CA03 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc46a2Q8CA03 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a2Q8CA03 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a2Q8CA03 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a2Q8CA03 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc46a2Q8CA03 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Slc46a2Q8CA03 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms