Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap54Q8C6S9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap54Q8C6S9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cfap54Q8C6S9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap54Q8C6S9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cfap54Q8C6S9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap54Q8C6S9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cfap54Q8C6S9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap54Q8C6S9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap54Q8C6S9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Gm10033-202ENSMUST00000211874 928 ntBASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap54Q8C6S9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap54Q8C6S9 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.04■□□□□ 0.8
Cfap54Q8C6S9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap54Q8C6S9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap54Q8C6S9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap54Q8C6S9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap54Q8C6S9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.02■□□□□ 0.8
Cfap54Q8C6S9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap54Q8C6S9 Gm40848-201ENSMUST00000221998 324 ntBASIC20.02■□□□□ 0.8
Cfap54Q8C6S9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Cfap54Q8C6S9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap54Q8C6S9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap54Q8C6S9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cfap54Q8C6S9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cfap54Q8C6S9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cfap54Q8C6S9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap54Q8C6S9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap54Q8C6S9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap54Q8C6S9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.98■□□□□ 0.79
Cfap54Q8C6S9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.98■□□□□ 0.79
Cfap54Q8C6S9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms