Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ptcd1Q8C2E4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ptcd1Q8C2E4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Ptcd1Q8C2E4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ptcd1Q8C2E4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ptcd1Q8C2E4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC25.45■■□□□ 1.66
Ptcd1Q8C2E4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ptcd1Q8C2E4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ptcd1Q8C2E4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ptcd1Q8C2E4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Ptcd1Q8C2E4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptcd1Q8C2E4 Gm42569-201ENSMUST00000200539 472 ntBASIC25.44■■□□□ 1.66
Ptcd1Q8C2E4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptcd1Q8C2E4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC25.44■■□□□ 1.66
Ptcd1Q8C2E4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptcd1Q8C2E4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptcd1Q8C2E4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptcd1Q8C2E4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptcd1Q8C2E4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptcd1Q8C2E4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.43■■□□□ 1.66
Ptcd1Q8C2E4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
Ptcd1Q8C2E4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Ptcd1Q8C2E4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC25.43■■□□□ 1.66
Ptcd1Q8C2E4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Gm8770-201ENSMUST00000121113 1109 ntBASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Gm26571-201ENSMUST00000181399 666 ntBASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Gm27405-201ENSMUST00000184201 112 ntBASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptcd1Q8C2E4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptcd1Q8C2E4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ptcd1Q8C2E4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
Ptcd1Q8C2E4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptcd1Q8C2E4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptcd1Q8C2E4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptcd1Q8C2E4 Gm10657-201ENSMUST00000193528 1031 ntBASIC25.4■■□□□ 1.66
Ptcd1Q8C2E4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Ptcd1Q8C2E4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ptcd1Q8C2E4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ptcd1Q8C2E4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC25.39■■□□□ 1.66
Ptcd1Q8C2E4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Ptcd1Q8C2E4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.39■■□□□ 1.65
Ptcd1Q8C2E4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ptcd1Q8C2E4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ptcd1Q8C2E4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ptcd1Q8C2E4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.38■■□□□ 1.65
Ptcd1Q8C2E4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ptcd1Q8C2E4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC25.37■■□□□ 1.65
Ptcd1Q8C2E4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptcd1Q8C2E4 Gm10493-201ENSMUST00000097270 612 ntBASIC25.37■■□□□ 1.65
Ptcd1Q8C2E4 Gm12251-201ENSMUST00000117893 792 ntBASIC25.36■■□□□ 1.65
Ptcd1Q8C2E4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
Ptcd1Q8C2E4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Ptcd1Q8C2E4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ptcd1Q8C2E4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ptcd1Q8C2E4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC25.36■■□□□ 1.65
Ptcd1Q8C2E4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ptcd1Q8C2E4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
Ptcd1Q8C2E4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptcd1Q8C2E4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Ptcd1Q8C2E4 Gm43759-201ENSMUST00000196925 1261 ntBASIC25.35■■□□□ 1.65
Ptcd1Q8C2E4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptcd1Q8C2E4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptcd1Q8C2E4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptcd1Q8C2E4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC25.34■■□□□ 1.65
Ptcd1Q8C2E4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Ptcd1Q8C2E4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptcd1Q8C2E4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptcd1Q8C2E4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptcd1Q8C2E4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptcd1Q8C2E4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Ptcd1Q8C2E4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptcd1Q8C2E4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptcd1Q8C2E4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptcd1Q8C2E4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Ptcd1Q8C2E4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
Ptcd1Q8C2E4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ptcd1Q8C2E4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC25.32■■□□□ 1.64
Ptcd1Q8C2E4 Gm26833-201ENSMUST00000180899 440 ntBASIC25.32■■□□□ 1.64
Ptcd1Q8C2E4 Gm42642-201ENSMUST00000200683 355 ntBASIC25.32■■□□□ 1.64
Ptcd1Q8C2E4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Ptcd1Q8C2E4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ptcd1Q8C2E4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ptcd1Q8C2E4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ptcd1Q8C2E4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptcd1Q8C2E4 Gm43060-201ENSMUST00000200621 289 ntBASIC25.31■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms