Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Gm45444-201ENSMUST00000211394 898 ntBASIC20.61■□□□□ 0.89
Zfp398Q8BV16 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp398Q8BV16 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.61■□□□□ 0.89
Zfp398Q8BV16 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Zfp398Q8BV16 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zfp398Q8BV16 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.61■□□□□ 0.89
Zfp398Q8BV16 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zfp398Q8BV16 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp398Q8BV16 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Zfp398Q8BV16 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Zfp398Q8BV16 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp398Q8BV16 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp398Q8BV16 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp398Q8BV16 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp398Q8BV16 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zfp398Q8BV16 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp398Q8BV16 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp398Q8BV16 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp398Q8BV16 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp398Q8BV16 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.58■□□□□ 0.89
Zfp398Q8BV16 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zfp398Q8BV16 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.58■□□□□ 0.89
Zfp398Q8BV16 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zfp398Q8BV16 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Zfp398Q8BV16 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp398Q8BV16 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp398Q8BV16 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp398Q8BV16 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp398Q8BV16 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp398Q8BV16 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp398Q8BV16 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp398Q8BV16 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp398Q8BV16 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp398Q8BV16 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp398Q8BV16 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.53■□□□□ 0.88
Zfp398Q8BV16 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp398Q8BV16 Gm13238-201ENSMUST00000117655 780 ntBASIC20.53■□□□□ 0.88
Zfp398Q8BV16 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp398Q8BV16 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp398Q8BV16 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Zfp398Q8BV16 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp398Q8BV16 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp398Q8BV16 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp398Q8BV16 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Zfp398Q8BV16 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Zfp398Q8BV16 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Zfp398Q8BV16 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Zfp398Q8BV16 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp398Q8BV16 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Zfp398Q8BV16 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Zfp398Q8BV16 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Zfp398Q8BV16 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp398Q8BV16 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp398Q8BV16 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms