Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn3bQ8BHK2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.09■□□□□ 0.65
Scn3bQ8BHK2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn3bQ8BHK2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn3bQ8BHK2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Scn3bQ8BHK2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Scn3bQ8BHK2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Scn3bQ8BHK2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Scn3bQ8BHK2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Scn3bQ8BHK2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.08■□□□□ 0.64
Scn3bQ8BHK2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn3bQ8BHK2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn3bQ8BHK2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.08■□□□□ 0.64
Scn3bQ8BHK2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn3bQ8BHK2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn3bQ8BHK2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn3bQ8BHK2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.06■□□□□ 0.64
Scn3bQ8BHK2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn3bQ8BHK2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn3bQ8BHK2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn3bQ8BHK2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn3bQ8BHK2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn3bQ8BHK2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn3bQ8BHK2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn3bQ8BHK2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn3bQ8BHK2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn3bQ8BHK2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn3bQ8BHK2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.03■□□□□ 0.64
Scn3bQ8BHK2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn3bQ8BHK2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.03■□□□□ 0.64
Scn3bQ8BHK2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Scn3bQ8BHK2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Scn3bQ8BHK2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
Scn3bQ8BHK2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Scn3bQ8BHK2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn3bQ8BHK2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.01■□□□□ 0.63
Scn3bQ8BHK2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn3bQ8BHK2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn3bQ8BHK2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn3bQ8BHK2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn3bQ8BHK2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn3bQ8BHK2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn3bQ8BHK2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn3bQ8BHK2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn3bQ8BHK2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19■□□□□ 0.63
Scn3bQ8BHK2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn3bQ8BHK2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn3bQ8BHK2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn3bQ8BHK2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Scn3bQ8BHK2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn3bQ8BHK2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms