Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Snhg20-203ENSMUST00000182811 2153 ntBASIC24■■□□□ 1.43
Samm50Q8BGH2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24■■□□□ 1.43
Samm50Q8BGH2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24■■□□□ 1.43
Samm50Q8BGH2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Samm50Q8BGH2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC24■■□□□ 1.43
Samm50Q8BGH2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Samm50Q8BGH2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Samm50Q8BGH2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Samm50Q8BGH2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Samm50Q8BGH2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Samm50Q8BGH2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Samm50Q8BGH2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Samm50Q8BGH2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Samm50Q8BGH2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Samm50Q8BGH2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Samm50Q8BGH2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Samm50Q8BGH2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Samm50Q8BGH2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.43
Samm50Q8BGH2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Samm50Q8BGH2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
Samm50Q8BGH2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Samm50Q8BGH2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Samm50Q8BGH2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Samm50Q8BGH2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.94■■□□□ 1.42
Samm50Q8BGH2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Samm50Q8BGH2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Samm50Q8BGH2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Samm50Q8BGH2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Samm50Q8BGH2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Samm50Q8BGH2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Gm9959-201ENSMUST00000068277 390 ntBASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.92■■□□□ 1.42
Samm50Q8BGH2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Samm50Q8BGH2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Samm50Q8BGH2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.91■■□□□ 1.42
Samm50Q8BGH2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.91■■□□□ 1.42
Samm50Q8BGH2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Samm50Q8BGH2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Samm50Q8BGH2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Gm14117-201ENSMUST00000122417 843 ntBASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Gm45102-201ENSMUST00000207427 857 ntBASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Samm50Q8BGH2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Samm50Q8BGH2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Samm50Q8BGH2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Samm50Q8BGH2 Etf1-202ENSMUST00000180351 108 ntBASIC23.89■■□□□ 1.41
Samm50Q8BGH2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Samm50Q8BGH2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Samm50Q8BGH2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Samm50Q8BGH2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Samm50Q8BGH2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Samm50Q8BGH2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.88■■□□□ 1.41
Samm50Q8BGH2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Samm50Q8BGH2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Samm50Q8BGH2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms