Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim50Q810I2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.02■□□□□ 0.8
Trim50Q810I2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim50Q810I2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim50Q810I2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim50Q810I2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim50Q810I2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Trim50Q810I2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim50Q810I2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim50Q810I2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.01■□□□□ 0.79
Trim50Q810I2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.01■□□□□ 0.79
Trim50Q810I2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim50Q810I2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim50Q810I2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim50Q810I2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim50Q810I2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim50Q810I2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim50Q810I2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim50Q810I2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim50Q810I2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20■□□□□ 0.79
Trim50Q810I2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim50Q810I2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20■□□□□ 0.79
Trim50Q810I2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim50Q810I2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim50Q810I2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim50Q810I2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim50Q810I2 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.99■□□□□ 0.79
Trim50Q810I2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim50Q810I2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.99■□□□□ 0.79
Trim50Q810I2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim50Q810I2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim50Q810I2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim50Q810I2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Trim50Q810I2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
Trim50Q810I2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim50Q810I2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim50Q810I2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Trim50Q810I2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim50Q810I2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim50Q810I2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim50Q810I2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim50Q810I2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim50Q810I2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim50Q810I2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim50Q810I2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim50Q810I2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim50Q810I2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim50Q810I2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim50Q810I2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim50Q810I2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trim50Q810I2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim50Q810I2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim50Q810I2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim50Q810I2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim50Q810I2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.96■□□□□ 0.79
Trim50Q810I2 Gm9959-201ENSMUST00000068277 390 ntBASIC19.96■□□□□ 0.79
Trim50Q810I2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim50Q810I2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim50Q810I2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim50Q810I2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Trim50Q810I2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim50Q810I2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim50Q810I2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim50Q810I2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim50Q810I2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim50Q810I2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim50Q810I2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim50Q810I2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim50Q810I2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim50Q810I2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim50Q810I2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim50Q810I2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim50Q810I2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim50Q810I2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim50Q810I2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim50Q810I2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim50Q810I2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim50Q810I2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim50Q810I2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim50Q810I2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim50Q810I2 Etf1-202ENSMUST00000180351 108 ntBASIC19.93■□□□□ 0.78
Trim50Q810I2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim50Q810I2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim50Q810I2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim50Q810I2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim50Q810I2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim50Q810I2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim50Q810I2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Trim50Q810I2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim50Q810I2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Gm7417-201ENSMUST00000192950 473 ntBASIC19.91■□□□□ 0.78
Trim50Q810I2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.91■□□□□ 0.78
Trim50Q810I2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim50Q810I2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim50Q810I2 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms