Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Kdm1aQ6ZQ88 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.75■■□□□ 1.23
Kdm1aQ6ZQ88 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Kdm1aQ6ZQ88 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Kdm1aQ6ZQ88 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.74■■□□□ 1.23
Kdm1aQ6ZQ88 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.74■■□□□ 1.23
Kdm1aQ6ZQ88 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Kdm1aQ6ZQ88 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Kdm1aQ6ZQ88 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Kdm1aQ6ZQ88 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Kdm1aQ6ZQ88 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Kdm1aQ6ZQ88 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Kdm1aQ6ZQ88 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.72■■□□□ 1.23
Kdm1aQ6ZQ88 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Kdm1aQ6ZQ88 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Kdm1aQ6ZQ88 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Kdm1aQ6ZQ88 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.72■■□□□ 1.23
Kdm1aQ6ZQ88 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Kdm1aQ6ZQ88 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Kdm1aQ6ZQ88 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Kdm1aQ6ZQ88 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Kdm1aQ6ZQ88 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.7■■□□□ 1.22
Kdm1aQ6ZQ88 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Kdm1aQ6ZQ88 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Kdm1aQ6ZQ88 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.7■■□□□ 1.22
Kdm1aQ6ZQ88 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Kdm1aQ6ZQ88 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Gm10232-201ENSMUST00000089221 720 ntBASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Kdm1aQ6ZQ88 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.68■■□□□ 1.22
Kdm1aQ6ZQ88 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm1aQ6ZQ88 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm1aQ6ZQ88 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm1aQ6ZQ88 Gm10399-202ENSMUST00000202768 748 ntBASIC22.68■■□□□ 1.22
Kdm1aQ6ZQ88 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Kdm1aQ6ZQ88 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm1aQ6ZQ88 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm1aQ6ZQ88 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Kdm1aQ6ZQ88 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm1aQ6ZQ88 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm1aQ6ZQ88 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm1aQ6ZQ88 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.66■■□□□ 1.22
Kdm1aQ6ZQ88 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm1aQ6ZQ88 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.64■■□□□ 1.22
Kdm1aQ6ZQ88 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.64■■□□□ 1.22
Kdm1aQ6ZQ88 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Kdm1aQ6ZQ88 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Kdm1aQ6ZQ88 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.64■■□□□ 1.21
Kdm1aQ6ZQ88 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm1aQ6ZQ88 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm1aQ6ZQ88 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm1aQ6ZQ88 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm1aQ6ZQ88 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm1aQ6ZQ88 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm1aQ6ZQ88 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms