Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3bQ6PDC0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3bQ6PDC0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rundc3bQ6PDC0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rundc3bQ6PDC0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rundc3bQ6PDC0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.27■□□□□ 0.68
Rundc3bQ6PDC0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.27■□□□□ 0.68
Rundc3bQ6PDC0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rundc3bQ6PDC0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.27■□□□□ 0.68
Rundc3bQ6PDC0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rundc3bQ6PDC0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rundc3bQ6PDC0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rundc3bQ6PDC0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rundc3bQ6PDC0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rundc3bQ6PDC0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.26■□□□□ 0.67
Rundc3bQ6PDC0 Gm44428-201ENSMUST00000204474 874 ntBASIC19.26■□□□□ 0.67
Rundc3bQ6PDC0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rundc3bQ6PDC0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rundc3bQ6PDC0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rundc3bQ6PDC0 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.26■□□□□ 0.67
Rundc3bQ6PDC0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rundc3bQ6PDC0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3bQ6PDC0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3bQ6PDC0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rundc3bQ6PDC0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rundc3bQ6PDC0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3bQ6PDC0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.24■□□□□ 0.67
Rundc3bQ6PDC0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rundc3bQ6PDC0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Gm8503-201ENSMUST00000118131 455 ntBASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms