Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sp140Q6NSQ5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Gm10399-202ENSMUST00000202768 748 ntBASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sp140Q6NSQ5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms