Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sp140Q6NSQ5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sp140Q6NSQ5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sp140Q6NSQ5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sp140Q6NSQ5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sp140Q6NSQ5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sp140Q6NSQ5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sp140Q6NSQ5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Gm10399-202ENSMUST00000202768 748 ntBASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sp140Q6NSQ5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Sp140Q6NSQ5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sp140Q6NSQ5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sp140Q6NSQ5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sp140Q6NSQ5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms