Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga7Q6DD96 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga7Q6DD96 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhga7Q6DD96 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.89■□□□□ 0.77
Pcdhga7Q6DD96 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhga7Q6DD96 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhga7Q6DD96 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Gm45444-201ENSMUST00000211394 898 ntBASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhga7Q6DD96 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga7Q6DD96 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdhga7Q6DD96 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhga7Q6DD96 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga7Q6DD96 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Pcdhga7Q6DD96 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga7Q6DD96 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdhga7Q6DD96 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga7Q6DD96 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga7Q6DD96 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga7Q6DD96 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhga7Q6DD96 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga7Q6DD96 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhga7Q6DD96 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.85■□□□□ 0.77
Pcdhga7Q6DD96 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga7Q6DD96 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga7Q6DD96 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.83■□□□□ 0.77
Pcdhga7Q6DD96 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga7Q6DD96 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga7Q6DD96 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga7Q6DD96 Golph3-202ENSMUST00000226517 2359 ntBASIC19.83■□□□□ 0.77
Pcdhga7Q6DD96 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhga7Q6DD96 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga7Q6DD96 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga7Q6DD96 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga7Q6DD96 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga7Q6DD96 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga7Q6DD96 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhga7Q6DD96 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Gm13238-201ENSMUST00000117655 780 ntBASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga7Q6DD96 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga7Q6DD96 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga7Q6DD96 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga7Q6DD96 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga7Q6DD96 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms