Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcfc1Q61191 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hcfc1Q61191 Gm10033-202ENSMUST00000211874 928 ntBASIC17.58■□□□□ 0.4
Hcfc1Q61191 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1Q61191 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1Q61191 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc1Q61191 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc1Q61191 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Hcfc1Q61191 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Hcfc1Q61191 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Hcfc1Q61191 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hcfc1Q61191 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc1Q61191 Smad6-203ENSMUST00000179458 273 ntBASIC17.57■□□□□ 0.4
Hcfc1Q61191 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc1Q61191 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.57■□□□□ 0.4
Hcfc1Q61191 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1Q61191 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.56■□□□□ 0.4
Hcfc1Q61191 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc1Q61191 Gm42569-201ENSMUST00000200539 472 ntBASIC17.55■□□□□ 0.4
Hcfc1Q61191 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Gm42642-201ENSMUST00000200683 355 ntBASIC17.55■□□□□ 0.4
Hcfc1Q61191 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.55■□□□□ 0.4
Hcfc1Q61191 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1Q61191 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1Q61191 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hcfc1Q61191 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1Q61191 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1Q61191 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1Q61191 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc1Q61191 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1Q61191 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1Q61191 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1Q61191 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1Q61191 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Hcfc1Q61191 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc1Q61191 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.52■□□□□ 0.4
Hcfc1Q61191 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.52■□□□□ 0.4
Hcfc1Q61191 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc1Q61191 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc1Q61191 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc1Q61191 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.51■□□□□ 0.39
Hcfc1Q61191 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc1Q61191 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc1Q61191 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hcfc1Q61191 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc1Q61191 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc1Q61191 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Hcfc1Q61191 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.49■□□□□ 0.39
Hcfc1Q61191 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hcfc1Q61191 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.49■□□□□ 0.39
Hcfc1Q61191 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcfc1Q61191 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.49■□□□□ 0.39
Hcfc1Q61191 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hcfc1Q61191 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcfc1Q61191 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hcfc1Q61191 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcfc1Q61191 Gm27011-201ENSMUST00000182352 972 ntBASIC17.48■□□□□ 0.39
Hcfc1Q61191 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcfc1Q61191 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hcfc1Q61191 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcfc1Q61191 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.48■□□□□ 0.39
Hcfc1Q61191 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcfc1Q61191 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hcfc1Q61191 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hcfc1Q61191 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms