Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 AC165080.2-201ENSMUST00000217491 1530 ntBASIC30.48■■■□□ 2.47
Ptch1Q61115 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ptch1Q61115 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ptch1Q61115 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ptch1Q61115 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ptch1Q61115 Gm10209-201ENSMUST00000203397 1607 ntBASIC30.47■■■□□ 2.47
Ptch1Q61115 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ptch1Q61115 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ptch1Q61115 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ptch1Q61115 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ptch1Q61115 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
Ptch1Q61115 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ptch1Q61115 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ptch1Q61115 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Ptch1Q61115 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Ptch1Q61115 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ptch1Q61115 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
Ptch1Q61115 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Ptch1Q61115 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ptch1Q61115 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ptch1Q61115 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ptch1Q61115 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ptch1Q61115 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ptch1Q61115 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ptch1Q61115 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ptch1Q61115 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC30.42■■■□□ 2.46
Ptch1Q61115 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Ptch1Q61115 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC30.42■■■□□ 2.46
Ptch1Q61115 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ptch1Q61115 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ptch1Q61115 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Ptch1Q61115 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ptch1Q61115 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Ptch1Q61115 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Ptch1Q61115 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ptch1Q61115 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ptch1Q61115 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ptch1Q61115 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ptch1Q61115 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Ptch1Q61115 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC30.39■■■□□ 2.46
Ptch1Q61115 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC30.39■■■□□ 2.46
Ptch1Q61115 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ptch1Q61115 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC30.39■■■□□ 2.46
Ptch1Q61115 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Ptch1Q61115 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC30.39■■■□□ 2.46
Ptch1Q61115 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Ptch1Q61115 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ptch1Q61115 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Ptch1Q61115 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC30.38■■■□□ 2.45
Ptch1Q61115 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC30.38■■■□□ 2.45
Ptch1Q61115 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
Ptch1Q61115 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Ptch1Q61115 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Ptch1Q61115 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ptch1Q61115 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Ptch1Q61115 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC30.37■■■□□ 2.45
Ptch1Q61115 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ptch1Q61115 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC30.36■■■□□ 2.45
Ptch1Q61115 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC30.36■■■□□ 2.45
Ptch1Q61115 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ptch1Q61115 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ptch1Q61115 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ptch1Q61115 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
Ptch1Q61115 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC30.34■■■□□ 2.45
Ptch1Q61115 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC30.34■■■□□ 2.45
Ptch1Q61115 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ptch1Q61115 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
Ptch1Q61115 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.33■■■□□ 2.45
Ptch1Q61115 Gm12933-201ENSMUST00000120203 872 ntBASIC30.33■■■□□ 2.45
Ptch1Q61115 Gm10602-201ENSMUST00000098239 609 ntBASIC30.33■■■□□ 2.45
Ptch1Q61115 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC30.33■■■□□ 2.45
Ptch1Q61115 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC30.32■■■□□ 2.44
Ptch1Q61115 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC30.32■■■□□ 2.44
Ptch1Q61115 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ptch1Q61115 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ptch1Q61115 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ptch1Q61115 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Ptch1Q61115 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ptch1Q61115 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ptch1Q61115 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ptch1Q61115 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ptch1Q61115 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ptch1Q61115 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ptch1Q61115 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
Ptch1Q61115 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ptch1Q61115 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC30.3■■■□□ 2.44
Ptch1Q61115 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ptch1Q61115 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ptch1Q61115 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ptch1Q61115 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ptch1Q61115 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC30.29■■■□□ 2.44
Ptch1Q61115 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Ptch1Q61115 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ptch1Q61115 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ptch1Q61115 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ptch1Q61115 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ptch1Q61115 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC30.27■■■□□ 2.44
Ptch1Q61115 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC30.27■■■□□ 2.44
Ptch1Q61115 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
Ptch1Q61115 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms