Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav2Q5R1I9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav2Q5R1I9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav2Q5R1I9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav2Q5R1I9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav2Q5R1I9 Gm7143-201ENSMUST00000222811 859 ntBASIC16.37■□□□□ 0.21
Trav2Q5R1I9 Notumos-201ENSMUST00000151998 2659 ntBASIC16.37■□□□□ 0.21
Trav2Q5R1I9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav2Q5R1I9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav2Q5R1I9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.36■□□□□ 0.21
Trav2Q5R1I9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav2Q5R1I9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav2Q5R1I9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav2Q5R1I9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav2Q5R1I9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav2Q5R1I9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav2Q5R1I9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav2Q5R1I9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav2Q5R1I9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav2Q5R1I9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav2Q5R1I9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav2Q5R1I9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav2Q5R1I9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav2Q5R1I9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav2Q5R1I9 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.29■□□□□ 0.2
Trav2Q5R1I9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav2Q5R1I9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav2Q5R1I9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav2Q5R1I9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav2Q5R1I9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav2Q5R1I9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav2Q5R1I9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav2Q5R1I9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav2Q5R1I9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav2Q5R1I9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav2Q5R1I9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms