Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 AC093043.1-201ENSMUST00000226700 898 ntBASIC21■□□□□ 0.95
Trim80Q3V061 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim80Q3V061 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim80Q3V061 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trim80Q3V061 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Trim80Q3V061 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim80Q3V061 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Trim80Q3V061 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim80Q3V061 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim80Q3V061 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim80Q3V061 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim80Q3V061 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim80Q3V061 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim80Q3V061 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim80Q3V061 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim80Q3V061 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.98■□□□□ 0.95
Trim80Q3V061 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim80Q3V061 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim80Q3V061 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim80Q3V061 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim80Q3V061 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim80Q3V061 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim80Q3V061 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.97■□□□□ 0.95
Trim80Q3V061 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim80Q3V061 Gm15820-201ENSMUST00000201566 728 ntBASIC20.97■□□□□ 0.95
Trim80Q3V061 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim80Q3V061 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim80Q3V061 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim80Q3V061 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim80Q3V061 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim80Q3V061 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim80Q3V061 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim80Q3V061 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim80Q3V061 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim80Q3V061 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim80Q3V061 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Trim80Q3V061 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim80Q3V061 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim80Q3V061 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.95■□□□□ 0.94
Trim80Q3V061 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim80Q3V061 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim80Q3V061 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim80Q3V061 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Trim80Q3V061 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim80Q3V061 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim80Q3V061 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim80Q3V061 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim80Q3V061 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.93■□□□□ 0.94
Trim80Q3V061 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim80Q3V061 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim80Q3V061 Gm13238-201ENSMUST00000117655 780 ntBASIC20.93■□□□□ 0.94
Trim80Q3V061 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim80Q3V061 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim80Q3V061 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim80Q3V061 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim80Q3V061 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim80Q3V061 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim80Q3V061 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim80Q3V061 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim80Q3V061 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim80Q3V061 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim80Q3V061 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim80Q3V061 Gm45102-201ENSMUST00000207427 857 ntBASIC20.92■□□□□ 0.94
Trim80Q3V061 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim80Q3V061 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim80Q3V061 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim80Q3V061 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Trim80Q3V061 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim80Q3V061 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.92■□□□□ 0.94
Trim80Q3V061 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim80Q3V061 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim80Q3V061 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
Trim80Q3V061 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim80Q3V061 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim80Q3V061 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim80Q3V061 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim80Q3V061 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim80Q3V061 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
Trim80Q3V061 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim80Q3V061 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim80Q3V061 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim80Q3V061 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim80Q3V061 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim80Q3V061 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim80Q3V061 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim80Q3V061 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim80Q3V061 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim80Q3V061 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.89■□□□□ 0.93
Trim80Q3V061 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim80Q3V061 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Trim80Q3V061 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim80Q3V061 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms