Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.77■□□□□ 0.75
Ptchd3Q0EEE2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.76■□□□□ 0.75
Ptchd3Q0EEE2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd3Q0EEE2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd3Q0EEE2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd3Q0EEE2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ptchd3Q0EEE2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd3Q0EEE2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ptchd3Q0EEE2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ptchd3Q0EEE2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ptchd3Q0EEE2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptchd3Q0EEE2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ptchd3Q0EEE2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ptchd3Q0EEE2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ptchd3Q0EEE2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.73■□□□□ 0.75
Ptchd3Q0EEE2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ptchd3Q0EEE2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ptchd3Q0EEE2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ptchd3Q0EEE2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ptchd3Q0EEE2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ptchd3Q0EEE2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ptchd3Q0EEE2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ptchd3Q0EEE2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptchd3Q0EEE2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptchd3Q0EEE2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptchd3Q0EEE2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptchd3Q0EEE2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms