Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.79■□□□□ 0.92
Ebf1Q07802 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf1Q07802 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.79■□□□□ 0.92
Ebf1Q07802 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf1Q07802 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.78■□□□□ 0.92
Ebf1Q07802 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Ebf1Q07802 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.78■□□□□ 0.92
Ebf1Q07802 Gm43137-201ENSMUST00000198052 594 ntBASIC20.78■□□□□ 0.92
Ebf1Q07802 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.78■□□□□ 0.92
Ebf1Q07802 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf1Q07802 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf1Q07802 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf1Q07802 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf1Q07802 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf1Q07802 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf1Q07802 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf1Q07802 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf1Q07802 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf1Q07802 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Ebf1Q07802 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Ebf1Q07802 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ebf1Q07802 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf1Q07802 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Ebf1Q07802 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf1Q07802 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf1Q07802 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ebf1Q07802 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf1Q07802 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.77■□□□□ 0.92
Ebf1Q07802 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ebf1Q07802 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf1Q07802 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf1Q07802 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ebf1Q07802 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf1Q07802 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.76■□□□□ 0.91
Ebf1Q07802 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf1Q07802 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ebf1Q07802 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.76■□□□□ 0.91
Ebf1Q07802 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ebf1Q07802 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.76■□□□□ 0.91
Ebf1Q07802 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf1Q07802 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf1Q07802 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf1Q07802 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Ebf1Q07802 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf1Q07802 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ebf1Q07802 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf1Q07802 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.75■□□□□ 0.91
Ebf1Q07802 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ebf1Q07802 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf1Q07802 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf1Q07802 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf1Q07802 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf1Q07802 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.74■□□□□ 0.91
Ebf1Q07802 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf1Q07802 Mir7075-201ENSMUST00000184187 82 ntBASIC20.74■□□□□ 0.91
Ebf1Q07802 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Ebf1Q07802 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf1Q07802 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf1Q07802 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ebf1Q07802 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf1Q07802 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf1Q07802 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ebf1Q07802 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ebf1Q07802 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Ebf1Q07802 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Ebf1Q07802 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf1Q07802 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.73■□□□□ 0.91
Ebf1Q07802 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.73■□□□□ 0.91
Ebf1Q07802 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ebf1Q07802 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf1Q07802 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.72■□□□□ 0.91
Ebf1Q07802 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf1Q07802 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.72■□□□□ 0.91
Ebf1Q07802 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf1Q07802 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf1Q07802 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Ebf1Q07802 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf1Q07802 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf1Q07802 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ebf1Q07802 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf1Q07802 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf1Q07802 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf1Q07802 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ebf1Q07802 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf1Q07802 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf1Q07802 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf1Q07802 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.7■□□□□ 0.9
Ebf1Q07802 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.7■□□□□ 0.9
Ebf1Q07802 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.7■□□□□ 0.9
Ebf1Q07802 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf1Q07802 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf1Q07802 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf1Q07802 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
Ebf1Q07802 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ebf1Q07802 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf1Q07802 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf1Q07802 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.69■□□□□ 0.9
Ebf1Q07802 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf1Q07802 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.68■□□□□ 0.9
Ebf1Q07802 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms