Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.57■□□□□ 0.4
Smn1P97801 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smn1P97801 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smn1P97801 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smn1P97801 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smn1P97801 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.55■□□□□ 0.4
Smn1P97801 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Smn1P97801 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smn1P97801 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smn1P97801 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smn1P97801 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.55■□□□□ 0.4
Smn1P97801 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smn1P97801 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smn1P97801 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Smn1P97801 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smn1P97801 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smn1P97801 Golph3-202ENSMUST00000226517 2359 ntBASIC17.54■□□□□ 0.4
Smn1P97801 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smn1P97801 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smn1P97801 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smn1P97801 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smn1P97801 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smn1P97801 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smn1P97801 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smn1P97801 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smn1P97801 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smn1P97801 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smn1P97801 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smn1P97801 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smn1P97801 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smn1P97801 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.53■□□□□ 0.4
Smn1P97801 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smn1P97801 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smn1P97801 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.53■□□□□ 0.4
Smn1P97801 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smn1P97801 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smn1P97801 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Smn1P97801 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smn1P97801 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smn1P97801 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smn1P97801 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smn1P97801 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Smn1P97801 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smn1P97801 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Smn1P97801 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Smn1P97801 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.51■□□□□ 0.39
Smn1P97801 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smn1P97801 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smn1P97801 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smn1P97801 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smn1P97801 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smn1P97801 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smn1P97801 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smn1P97801 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smn1P97801 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smn1P97801 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smn1P97801 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smn1P97801 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smn1P97801 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.5■□□□□ 0.39
Smn1P97801 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smn1P97801 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.5■□□□□ 0.39
Smn1P97801 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smn1P97801 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.5■□□□□ 0.39
Smn1P97801 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smn1P97801 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.5■□□□□ 0.39
Smn1P97801 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smn1P97801 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smn1P97801 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smn1P97801 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smn1P97801 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.49■□□□□ 0.39
Smn1P97801 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smn1P97801 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smn1P97801 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smn1P97801 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smn1P97801 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms