Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.52□□□□□ -0.08
PrkdcP97313 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.52□□□□□ -0.08
PrkdcP97313 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrkdcP97313 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrkdcP97313 Gm43530-201ENSMUST00000195920 274 ntBASIC14.52□□□□□ -0.09
PrkdcP97313 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PrkdcP97313 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.51□□□□□ -0.09
PrkdcP97313 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.51□□□□□ -0.09
PrkdcP97313 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PrkdcP97313 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PrkdcP97313 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.51□□□□□ -0.09
PrkdcP97313 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PrkdcP97313 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PrkdcP97313 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
PrkdcP97313 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.5□□□□□ -0.09
PrkdcP97313 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrkdcP97313 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PrkdcP97313 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PrkdcP97313 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PrkdcP97313 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PrkdcP97313 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PrkdcP97313 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PrkdcP97313 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PrkdcP97313 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PrkdcP97313 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PrkdcP97313 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
PrkdcP97313 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PrkdcP97313 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PrkdcP97313 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PrkdcP97313 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PrkdcP97313 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PrkdcP97313 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PrkdcP97313 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PrkdcP97313 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PrkdcP97313 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PrkdcP97313 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PrkdcP97313 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.47□□□□□ -0.09
PrkdcP97313 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PrkdcP97313 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PrkdcP97313 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.47□□□□□ -0.09
PrkdcP97313 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.47□□□□□ -0.09
PrkdcP97313 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PrkdcP97313 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PrkdcP97313 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PrkdcP97313 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PrkdcP97313 Gm20760-201ENSMUST00000179197 648 ntBASIC14.46□□□□□ -0.09
PrkdcP97313 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PrkdcP97313 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.45□□□□□ -0.1
PrkdcP97313 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.45□□□□□ -0.1
PrkdcP97313 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PrkdcP97313 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.45□□□□□ -0.1
PrkdcP97313 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.45□□□□□ -0.1
PrkdcP97313 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PrkdcP97313 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PrkdcP97313 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PrkdcP97313 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PrkdcP97313 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PrkdcP97313 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PrkdcP97313 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.44□□□□□ -0.1
PrkdcP97313 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.44□□□□□ -0.1
PrkdcP97313 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.44□□□□□ -0.1
PrkdcP97313 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.44□□□□□ -0.1
PrkdcP97313 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PrkdcP97313 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PrkdcP97313 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
PrkdcP97313 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PrkdcP97313 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PrkdcP97313 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.44□□□□□ -0.1
PrkdcP97313 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PrkdcP97313 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PrkdcP97313 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PrkdcP97313 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PrkdcP97313 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PrkdcP97313 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PrkdcP97313 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PrkdcP97313 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PrkdcP97313 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PrkdcP97313 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PrkdcP97313 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PrkdcP97313 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.43□□□□□ -0.1
PrkdcP97313 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PrkdcP97313 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PrkdcP97313 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.42□□□□□ -0.1
PrkdcP97313 Gm42778-201ENSMUST00000199644 553 ntBASIC14.42□□□□□ -0.1
PrkdcP97313 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PrkdcP97313 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PrkdcP97313 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PrkdcP97313 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.41□□□□□ -0.1
PrkdcP97313 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PrkdcP97313 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PrkdcP97313 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PrkdcP97313 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms