Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crnkl1P63154 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.18■□□□□ 0.82
Crnkl1P63154 Gm12366-201ENSMUST00000121722 873 ntBASIC20.18■□□□□ 0.82
Crnkl1P63154 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.18■□□□□ 0.82
Crnkl1P63154 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crnkl1P63154 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.18■□□□□ 0.82
Crnkl1P63154 Gm5786-201ENSMUST00000085368 882 ntBASIC20.18■□□□□ 0.82
Crnkl1P63154 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crnkl1P63154 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crnkl1P63154 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crnkl1P63154 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crnkl1P63154 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crnkl1P63154 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crnkl1P63154 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crnkl1P63154 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Crnkl1P63154 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crnkl1P63154 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Crnkl1P63154 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Crnkl1P63154 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Crnkl1P63154 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.17■□□□□ 0.82
Crnkl1P63154 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crnkl1P63154 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crnkl1P63154 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crnkl1P63154 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.16■□□□□ 0.82
Crnkl1P63154 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.16■□□□□ 0.82
Crnkl1P63154 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Crnkl1P63154 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crnkl1P63154 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crnkl1P63154 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Crnkl1P63154 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Crnkl1P63154 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Crnkl1P63154 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Crnkl1P63154 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Crnkl1P63154 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Crnkl1P63154 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Crnkl1P63154 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Crnkl1P63154 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Crnkl1P63154 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Crnkl1P63154 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Crnkl1P63154 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Crnkl1P63154 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Crnkl1P63154 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Crnkl1P63154 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Crnkl1P63154 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Crnkl1P63154 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Crnkl1P63154 Gm14523-201ENSMUST00000117260 558 ntBASIC20.13■□□□□ 0.81
Crnkl1P63154 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Crnkl1P63154 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Crnkl1P63154 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.13■□□□□ 0.81
Crnkl1P63154 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Crnkl1P63154 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crnkl1P63154 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crnkl1P63154 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crnkl1P63154 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crnkl1P63154 Gm7332-201ENSMUST00000118351 454 ntBASIC20.12■□□□□ 0.81
Crnkl1P63154 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crnkl1P63154 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crnkl1P63154 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Crnkl1P63154 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crnkl1P63154 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crnkl1P63154 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Crnkl1P63154 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.12■□□□□ 0.81
Crnkl1P63154 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Crnkl1P63154 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Crnkl1P63154 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Crnkl1P63154 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.11■□□□□ 0.81
Crnkl1P63154 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Crnkl1P63154 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Crnkl1P63154 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Crnkl1P63154 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Crnkl1P63154 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Crnkl1P63154 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Crnkl1P63154 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Crnkl1P63154 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Crnkl1P63154 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.11■□□□□ 0.81
Crnkl1P63154 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Crnkl1P63154 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Crnkl1P63154 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Crnkl1P63154 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Crnkl1P63154 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Crnkl1P63154 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Crnkl1P63154 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Crnkl1P63154 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Crnkl1P63154 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Crnkl1P63154 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Crnkl1P63154 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Crnkl1P63154 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Crnkl1P63154 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.08■□□□□ 0.81
Crnkl1P63154 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Crnkl1P63154 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Crnkl1P63154 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.08■□□□□ 0.81
Crnkl1P63154 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.08■□□□□ 0.81
Crnkl1P63154 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Crnkl1P63154 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.08■□□□□ 0.81
Crnkl1P63154 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.08■□□□□ 0.8
Crnkl1P63154 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.08■□□□□ 0.8
Crnkl1P63154 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Crnkl1P63154 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Crnkl1P63154 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Crnkl1P63154 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms