Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Lsm6P62313 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm6P62313 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Lsm6P62313 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm6P62313 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.02■□□□□ 0.48
Lsm6P62313 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm6P62313 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm6P62313 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm6P62313 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm6P62313 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm6P62313 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Lsm6P62313 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm6P62313 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Lsm6P62313 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm6P62313 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm6P62313 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm6P62313 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Lsm6P62313 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.01■□□□□ 0.47
Lsm6P62313 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm6P62313 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm6P62313 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm6P62313 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lsm6P62313 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm6P62313 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm6P62313 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lsm6P62313 Gm40881-201ENSMUST00000223397 166 ntBASIC18■□□□□ 0.47
Lsm6P62313 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm6P62313 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm6P62313 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18■□□□□ 0.47
Lsm6P62313 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm6P62313 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Lsm6P62313 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm6P62313 Gm5812-201ENSMUST00000061073 957 ntBASIC17.99■□□□□ 0.47
Lsm6P62313 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm6P62313 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm6P62313 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm6P62313 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm6P62313 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm6P62313 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.98■□□□□ 0.47
Lsm6P62313 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm6P62313 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Lsm6P62313 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm6P62313 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm6P62313 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Lsm6P62313 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Lsm6P62313 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm6P62313 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm6P62313 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm6P62313 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.97■□□□□ 0.47
Lsm6P62313 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.97■□□□□ 0.47
Lsm6P62313 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.97■□□□□ 0.47
Lsm6P62313 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.97■□□□□ 0.47
Lsm6P62313 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm6P62313 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Lsm6P62313 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Lsm6P62313 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm6P62313 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm6P62313 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm6P62313 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm6P62313 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Lsm6P62313 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm6P62313 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.96■□□□□ 0.46
Lsm6P62313 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm6P62313 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm6P62313 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.95■□□□□ 0.46
Lsm6P62313 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.95■□□□□ 0.46
Lsm6P62313 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm6P62313 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lsm6P62313 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm6P62313 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm6P62313 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm6P62313 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm6P62313 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm6P62313 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm6P62313 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Lsm6P62313 Gm15820-201ENSMUST00000201566 728 ntBASIC17.94■□□□□ 0.46
Lsm6P62313 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm6P62313 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Lsm6P62313 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm6P62313 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Lsm6P62313 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.93■□□□□ 0.46
Lsm6P62313 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.93■□□□□ 0.46
Lsm6P62313 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.93■□□□□ 0.46
Lsm6P62313 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm6P62313 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm6P62313 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Lsm6P62313 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm6P62313 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm6P62313 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm6P62313 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm6P62313 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lsm6P62313 Gm15546-201ENSMUST00000122095 826 ntBASIC17.92■□□□□ 0.46
Lsm6P62313 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.92■□□□□ 0.46
Lsm6P62313 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm6P62313 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm6P62313 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm6P62313 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm6P62313 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 127.6 ms