Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm3P62311 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm3P62311 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.7■□□□□ 0.58
Lsm3P62311 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm3P62311 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lsm3P62311 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Lsm3P62311 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm3P62311 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm3P62311 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lsm3P62311 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.7■□□□□ 0.58
Lsm3P62311 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm3P62311 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lsm3P62311 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.69■□□□□ 0.58
Lsm3P62311 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm3P62311 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm3P62311 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lsm3P62311 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm3P62311 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm3P62311 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm3P62311 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm3P62311 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.68■□□□□ 0.58
Lsm3P62311 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm3P62311 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm3P62311 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm3P62311 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm3P62311 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lsm3P62311 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lsm3P62311 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm3P62311 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm3P62311 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.67■□□□□ 0.58
Lsm3P62311 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.67■□□□□ 0.58
Lsm3P62311 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm3P62311 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lsm3P62311 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm3P62311 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
Lsm3P62311 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Lsm3P62311 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm3P62311 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lsm3P62311 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm3P62311 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm3P62311 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm3P62311 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Lsm3P62311 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.65■□□□□ 0.58
Lsm3P62311 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm3P62311 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm3P62311 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm3P62311 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lsm3P62311 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lsm3P62311 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.64■□□□□ 0.57
Lsm3P62311 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.64■□□□□ 0.57
Lsm3P62311 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.64■□□□□ 0.57
Lsm3P62311 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lsm3P62311 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm3P62311 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lsm3P62311 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lsm3P62311 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm3P62311 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.62■□□□□ 0.57
Lsm3P62311 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm3P62311 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm3P62311 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm3P62311 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.62■□□□□ 0.57
Lsm3P62311 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.62■□□□□ 0.57
Lsm3P62311 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm3P62311 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm3P62311 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm3P62311 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.62■□□□□ 0.57
Lsm3P62311 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lsm3P62311 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm3P62311 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm3P62311 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.61■□□□□ 0.57
Lsm3P62311 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm3P62311 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms