Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Gm45364-201ENSMUST00000210883 159 ntBASIC19.86■□□□□ 0.77
Ythdf1P59326 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ythdf1P59326 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.85■□□□□ 0.77
Ythdf1P59326 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ythdf1P59326 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ythdf1P59326 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ythdf1P59326 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.85■□□□□ 0.77
Ythdf1P59326 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ythdf1P59326 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Ythdf1P59326 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ythdf1P59326 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ythdf1P59326 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ythdf1P59326 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.84■□□□□ 0.77
Ythdf1P59326 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ythdf1P59326 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ythdf1P59326 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ythdf1P59326 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ythdf1P59326 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ythdf1P59326 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ythdf1P59326 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
Ythdf1P59326 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.83■□□□□ 0.77
Ythdf1P59326 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ythdf1P59326 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.83■□□□□ 0.77
Ythdf1P59326 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ythdf1P59326 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ythdf1P59326 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ythdf1P59326 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ythdf1P59326 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ythdf1P59326 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.82■□□□□ 0.76
Ythdf1P59326 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ythdf1P59326 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Ythdf1P59326 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ythdf1P59326 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ythdf1P59326 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ythdf1P59326 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ythdf1P59326 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ythdf1P59326 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ythdf1P59326 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ythdf1P59326 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ythdf1P59326 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.79■□□□□ 0.76
Ythdf1P59326 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Ythdf1P59326 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ythdf1P59326 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ythdf1P59326 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ythdf1P59326 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ythdf1P59326 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ythdf1P59326 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ythdf1P59326 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ythdf1P59326 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ythdf1P59326 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ythdf1P59326 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ythdf1P59326 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ythdf1P59326 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.77■□□□□ 0.76
Ythdf1P59326 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ythdf1P59326 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ythdf1P59326 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ythdf1P59326 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ythdf1P59326 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ythdf1P59326 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.77■□□□□ 0.76
Ythdf1P59326 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ythdf1P59326 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ythdf1P59326 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ythdf1P59326 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ythdf1P59326 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ythdf1P59326 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.76■□□□□ 0.75
Ythdf1P59326 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ythdf1P59326 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ythdf1P59326 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ythdf1P59326 Gm44428-201ENSMUST00000204474 874 ntBASIC19.75■□□□□ 0.75
Ythdf1P59326 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ythdf1P59326 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ythdf1P59326 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ythdf1P59326 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ythdf1P59326 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ythdf1P59326 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ythdf1P59326 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ythdf1P59326 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ythdf1P59326 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ythdf1P59326 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.74■□□□□ 0.75
Ythdf1P59326 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms