Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.4■□□□□ 0.86
Atxn1P54254 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atxn1P54254 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atxn1P54254 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atxn1P54254 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atxn1P54254 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atxn1P54254 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atxn1P54254 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atxn1P54254 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atxn1P54254 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atxn1P54254 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.39■□□□□ 0.85
Atxn1P54254 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Atxn1P54254 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.38■□□□□ 0.85
Atxn1P54254 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Atxn1P54254 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.38■□□□□ 0.85
Atxn1P54254 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 Gm9870-201ENSMUST00000063874 645 ntBASIC20.38■□□□□ 0.85
Atxn1P54254 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.38■□□□□ 0.85
Atxn1P54254 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atxn1P54254 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Atxn1P54254 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Atxn1P54254 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atxn1P54254 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Atxn1P54254 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atxn1P54254 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atxn1P54254 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Atxn1P54254 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Atxn1P54254 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atxn1P54254 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.37■□□□□ 0.85
Atxn1P54254 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atxn1P54254 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Atxn1P54254 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atxn1P54254 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atxn1P54254 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.36■□□□□ 0.85
Atxn1P54254 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atxn1P54254 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atxn1P54254 Gm10493-201ENSMUST00000097270 612 ntBASIC20.36■□□□□ 0.85
Atxn1P54254 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Atxn1P54254 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atxn1P54254 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.35■□□□□ 0.85
Atxn1P54254 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atxn1P54254 Gm43173-201ENSMUST00000202246 593 ntBASIC20.35■□□□□ 0.85
Atxn1P54254 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atxn1P54254 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atxn1P54254 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atxn1P54254 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atxn1P54254 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atxn1P54254 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atxn1P54254 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atxn1P54254 Gm42642-201ENSMUST00000200683 355 ntBASIC20.34■□□□□ 0.85
Atxn1P54254 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Atxn1P54254 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atxn1P54254 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atxn1P54254 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atxn1P54254 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atxn1P54254 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atxn1P54254 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atxn1P54254 Gm10849-201ENSMUST00000100397 618 ntBASIC20.33■□□□□ 0.85
Atxn1P54254 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Atxn1P54254 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atxn1P54254 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atxn1P54254 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.33■□□□□ 0.84
Atxn1P54254 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.33■□□□□ 0.84
Atxn1P54254 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atxn1P54254 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.32■□□□□ 0.84
Atxn1P54254 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atxn1P54254 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atxn1P54254 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Atxn1P54254 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atxn1P54254 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.32■□□□□ 0.84
Atxn1P54254 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atxn1P54254 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atxn1P54254 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atxn1P54254 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atxn1P54254 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Atxn1P54254 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atxn1P54254 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atxn1P54254 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atxn1P54254 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atxn1P54254 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.3■□□□□ 0.84
Atxn1P54254 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atxn1P54254 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.3■□□□□ 0.84
Atxn1P54254 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.3■□□□□ 0.84
Atxn1P54254 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.3■□□□□ 0.84
Atxn1P54254 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atxn1P54254 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Atxn1P54254 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atxn1P54254 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.3■□□□□ 0.84
Atxn1P54254 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Atxn1P54254 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atxn1P54254 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atxn1P54254 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atxn1P54254 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms