Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hmga2P52927 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hmga2P52927 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga2P52927 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga2P52927 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hmga2P52927 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.52■□□□□ 0.4
Hmga2P52927 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hmga2P52927 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmga2P52927 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmga2P52927 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Hmga2P52927 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.51■□□□□ 0.39
Hmga2P52927 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Hmga2P52927 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga2P52927 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hmga2P52927 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.51■□□□□ 0.39
Hmga2P52927 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.5■□□□□ 0.39
Hmga2P52927 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Hmga2P52927 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Hmga2P52927 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.5■□□□□ 0.39
Hmga2P52927 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hmga2P52927 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga2P52927 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmga2P52927 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.49■□□□□ 0.39
Hmga2P52927 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmga2P52927 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmga2P52927 Gm11687-201ENSMUST00000118911 886 ntBASIC17.49■□□□□ 0.39
Hmga2P52927 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.49■□□□□ 0.39
Hmga2P52927 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.48■□□□□ 0.39
Hmga2P52927 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.48■□□□□ 0.39
Hmga2P52927 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hmga2P52927 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmga2P52927 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.47■□□□□ 0.39
Hmga2P52927 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hmga2P52927 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hmga2P52927 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmga2P52927 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmga2P52927 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmga2P52927 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hmga2P52927 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Hmga2P52927 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmga2P52927 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmga2P52927 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.46■□□□□ 0.39
Hmga2P52927 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmga2P52927 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmga2P52927 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmga2P52927 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hmga2P52927 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hmga2P52927 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.45■□□□□ 0.38
Hmga2P52927 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga2P52927 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga2P52927 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga2P52927 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga2P52927 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga2P52927 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga2P52927 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga2P52927 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Hmga2P52927 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Hmga2P52927 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms