Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps4bP46467 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps4bP46467 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps4bP46467 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps4bP46467 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.8■□□□□ 0.92
Vps4bP46467 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps4bP46467 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps4bP46467 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps4bP46467 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps4bP46467 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps4bP46467 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps4bP46467 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps4bP46467 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Vps4bP46467 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps4bP46467 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps4bP46467 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4bP46467 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4bP46467 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4bP46467 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4bP46467 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4bP46467 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4bP46467 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps4bP46467 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps4bP46467 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps4bP46467 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.77■□□□□ 0.92
Vps4bP46467 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps4bP46467 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Vps4bP46467 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.77■□□□□ 0.92
Vps4bP46467 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.77■□□□□ 0.92
Vps4bP46467 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Vps4bP46467 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps4bP46467 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.76■□□□□ 0.91
Vps4bP46467 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.76■□□□□ 0.91
Vps4bP46467 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4bP46467 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.76■□□□□ 0.91
Vps4bP46467 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.76■□□□□ 0.91
Vps4bP46467 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4bP46467 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4bP46467 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4bP46467 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps4bP46467 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Vps4bP46467 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps4bP46467 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Vps4bP46467 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps4bP46467 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps4bP46467 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Vps4bP46467 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.75■□□□□ 0.91
Vps4bP46467 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4bP46467 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4bP46467 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.74■□□□□ 0.91
Vps4bP46467 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Vps4bP46467 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4bP46467 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4bP46467 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.74■□□□□ 0.91
Vps4bP46467 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4bP46467 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4bP46467 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Vps4bP46467 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4bP46467 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4bP46467 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4bP46467 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4bP46467 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4bP46467 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.73■□□□□ 0.91
Vps4bP46467 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4bP46467 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4bP46467 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4bP46467 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.73■□□□□ 0.91
Vps4bP46467 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4bP46467 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps4bP46467 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps4bP46467 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps4bP46467 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.72■□□□□ 0.91
Vps4bP46467 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.72■□□□□ 0.91
Vps4bP46467 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Vps4bP46467 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4bP46467 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4bP46467 Gm43566-201ENSMUST00000196851 808 ntBASIC20.71■□□□□ 0.91
Vps4bP46467 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vps4bP46467 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4bP46467 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.71■□□□□ 0.91
Vps4bP46467 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Vps4bP46467 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Vps4bP46467 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4bP46467 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4bP46467 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.7■□□□□ 0.9
Vps4bP46467 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.7■□□□□ 0.9
Vps4bP46467 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4bP46467 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4bP46467 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Vps4bP46467 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4bP46467 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4bP46467 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4bP46467 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4bP46467 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Vps4bP46467 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4bP46467 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4bP46467 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4bP46467 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vps4bP46467 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4bP46467 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms