Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h1dP43277 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h1dP43277 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.38■□□□□ 0.37
Hist1h1dP43277 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hist1h1dP43277 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.38■□□□□ 0.37
Hist1h1dP43277 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h1dP43277 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h1dP43277 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hist1h1dP43277 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.37■□□□□ 0.37
Hist1h1dP43277 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1dP43277 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1dP43277 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1dP43277 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1dP43277 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1dP43277 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1dP43277 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1dP43277 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.36■□□□□ 0.37
Hist1h1dP43277 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hist1h1dP43277 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.34■□□□□ 0.37
Hist1h1dP43277 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h1dP43277 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.33■□□□□ 0.37
Hist1h1dP43277 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h1dP43277 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h1dP43277 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h1dP43277 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.33■□□□□ 0.37
Hist1h1dP43277 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h1dP43277 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h1dP43277 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h1dP43277 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h1dP43277 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h1dP43277 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h1dP43277 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h1dP43277 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h1dP43277 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Hist1h1dP43277 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.32■□□□□ 0.36
Hist1h1dP43277 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.32■□□□□ 0.36
Hist1h1dP43277 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h1dP43277 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.31■□□□□ 0.36
Hist1h1dP43277 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h1dP43277 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h1dP43277 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h1dP43277 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h1dP43277 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h1dP43277 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h1dP43277 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h1dP43277 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hist1h1dP43277 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h1dP43277 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hist1h1dP43277 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Hist1h1dP43277 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms