Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.49■■□□□ 1.03
Cxcl12P40224 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Cxcl12P40224 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cxcl12P40224 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.48■■□□□ 1.03
Cxcl12P40224 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.48■■□□□ 1.03
Cxcl12P40224 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cxcl12P40224 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
Cxcl12P40224 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cxcl12P40224 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cxcl12P40224 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cxcl12P40224 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.47■■□□□ 1.03
Cxcl12P40224 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cxcl12P40224 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Cxcl12P40224 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cxcl12P40224 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.46■■□□□ 1.03
Cxcl12P40224 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.46■■□□□ 1.03
Cxcl12P40224 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cxcl12P40224 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Cxcl12P40224 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cxcl12P40224 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Cxcl12P40224 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.45■■□□□ 1.02
Cxcl12P40224 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.45■■□□□ 1.02
Cxcl12P40224 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.45■■□□□ 1.02
Cxcl12P40224 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cxcl12P40224 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.45■■□□□ 1.02
Cxcl12P40224 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Cxcl12P40224 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cxcl12P40224 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cxcl12P40224 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cxcl12P40224 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cxcl12P40224 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cxcl12P40224 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cxcl12P40224 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cxcl12P40224 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.43■■□□□ 1.02
Cxcl12P40224 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cxcl12P40224 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cxcl12P40224 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Cxcl12P40224 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.42■■□□□ 1.02
Cxcl12P40224 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.42■■□□□ 1.02
Cxcl12P40224 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cxcl12P40224 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cxcl12P40224 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cxcl12P40224 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cxcl12P40224 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cxcl12P40224 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cxcl12P40224 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cxcl12P40224 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cxcl12P40224 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cxcl12P40224 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cxcl12P40224 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cxcl12P40224 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.4■■□□□ 1.02
Cxcl12P40224 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cxcl12P40224 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cxcl12P40224 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cxcl12P40224 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cxcl12P40224 Gm12933-201ENSMUST00000120203 872 ntBASIC21.39■■□□□ 1.01
Cxcl12P40224 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cxcl12P40224 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.39■■□□□ 1.01
Cxcl12P40224 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.39■■□□□ 1.01
Cxcl12P40224 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.39■■□□□ 1.01
Cxcl12P40224 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cxcl12P40224 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Cxcl12P40224 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cxcl12P40224 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cxcl12P40224 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cxcl12P40224 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cxcl12P40224 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
Cxcl12P40224 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cxcl12P40224 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cxcl12P40224 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Cxcl12P40224 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cxcl12P40224 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.38■■□□□ 1.01
Cxcl12P40224 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.38■■□□□ 1.01
Cxcl12P40224 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cxcl12P40224 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cxcl12P40224 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cxcl12P40224 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cxcl12P40224 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.37■■□□□ 1.01
Cxcl12P40224 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cxcl12P40224 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cxcl12P40224 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.37■■□□□ 1.01
Cxcl12P40224 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cxcl12P40224 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.37■■□□□ 1.01
Cxcl12P40224 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cxcl12P40224 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cxcl12P40224 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cxcl12P40224 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cxcl12P40224 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.36■■□□□ 1.01
Cxcl12P40224 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cxcl12P40224 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cxcl12P40224 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cxcl12P40224 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms