Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thbs1P35441 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Thbs1P35441 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
Thbs1P35441 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thbs1P35441 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Thbs1P35441 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.99■□□□□ 0.63
Thbs1P35441 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thbs1P35441 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thbs1P35441 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thbs1P35441 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thbs1P35441 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thbs1P35441 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Thbs1P35441 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.98■□□□□ 0.63
Thbs1P35441 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Thbs1P35441 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thbs1P35441 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thbs1P35441 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thbs1P35441 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thbs1P35441 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Thbs1P35441 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thbs1P35441 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.97■□□□□ 0.63
Thbs1P35441 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Thbs1P35441 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Thbs1P35441 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.97■□□□□ 0.63
Thbs1P35441 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Thbs1P35441 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.97■□□□□ 0.63
Thbs1P35441 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Thbs1P35441 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Thbs1P35441 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Thbs1P35441 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Thbs1P35441 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.96■□□□□ 0.63
Thbs1P35441 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thbs1P35441 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Thbs1P35441 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Thbs1P35441 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.95■□□□□ 0.62
Thbs1P35441 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thbs1P35441 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Thbs1P35441 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.94■□□□□ 0.62
Thbs1P35441 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Thbs1P35441 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thbs1P35441 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Thbs1P35441 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.94■□□□□ 0.62
Thbs1P35441 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Thbs1P35441 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thbs1P35441 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thbs1P35441 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thbs1P35441 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Thbs1P35441 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Thbs1P35441 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thbs1P35441 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thbs1P35441 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.93■□□□□ 0.62
Thbs1P35441 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Thbs1P35441 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Thbs1P35441 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Thbs1P35441 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thbs1P35441 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
Thbs1P35441 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thbs1P35441 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Thbs1P35441 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thbs1P35441 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thbs1P35441 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thbs1P35441 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thbs1P35441 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thbs1P35441 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Thbs1P35441 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Thbs1P35441 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thbs1P35441 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Thbs1P35441 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.91■□□□□ 0.62
Thbs1P35441 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.91■□□□□ 0.62
Thbs1P35441 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.91■□□□□ 0.62
Thbs1P35441 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Thbs1P35441 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thbs1P35441 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Thbs1P35441 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thbs1P35441 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thbs1P35441 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 369.5 ms