Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.59■□□□□ 0.41
Slc6a1P31648 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a1P31648 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.59■□□□□ 0.41
Slc6a1P31648 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a1P31648 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Slc6a1P31648 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a1P31648 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Slc6a1P31648 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a1P31648 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.58■□□□□ 0.4
Slc6a1P31648 Gm12366-201ENSMUST00000121722 873 ntBASIC17.58■□□□□ 0.4
Slc6a1P31648 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a1P31648 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Slc6a1P31648 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.58■□□□□ 0.4
Slc6a1P31648 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.58■□□□□ 0.4
Slc6a1P31648 Gm5786-201ENSMUST00000085368 882 ntBASIC17.58■□□□□ 0.4
Slc6a1P31648 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a1P31648 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a1P31648 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Slc6a1P31648 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slc6a1P31648 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a1P31648 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Slc6a1P31648 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a1P31648 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc6a1P31648 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc6a1P31648 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc6a1P31648 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a1P31648 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a1P31648 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a1P31648 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a1P31648 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a1P31648 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a1P31648 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a1P31648 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a1P31648 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a1P31648 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Slc6a1P31648 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a1P31648 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a1P31648 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Terc-201ENSMUST00000082862 423 ntBASIC17.55■□□□□ 0.4
Slc6a1P31648 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a1P31648 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a1P31648 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a1P31648 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a1P31648 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a1P31648 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a1P31648 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a1P31648 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Slc6a1P31648 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.54■□□□□ 0.4
Slc6a1P31648 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a1P31648 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a1P31648 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a1P31648 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.54■□□□□ 0.4
Slc6a1P31648 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a1P31648 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a1P31648 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc6a1P31648 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a1P31648 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a1P31648 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.53■□□□□ 0.4
Slc6a1P31648 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a1P31648 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a1P31648 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a1P31648 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc6a1P31648 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms