Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccl6P27784 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ccl6P27784 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl6P27784 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl6P27784 Gm15820-201ENSMUST00000201566 728 ntBASIC15.95■□□□□ 0.14
Ccl6P27784 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.95■□□□□ 0.14
Ccl6P27784 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ccl6P27784 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl6P27784 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl6P27784 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl6P27784 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl6P27784 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.94■□□□□ 0.14
Ccl6P27784 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.94■□□□□ 0.14
Ccl6P27784 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ccl6P27784 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl6P27784 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl6P27784 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl6P27784 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl6P27784 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl6P27784 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl6P27784 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.94■□□□□ 0.14
Ccl6P27784 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.93■□□□□ 0.14
Ccl6P27784 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ccl6P27784 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ccl6P27784 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ccl6P27784 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ccl6P27784 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccl6P27784 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.92■□□□□ 0.14
Ccl6P27784 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccl6P27784 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccl6P27784 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccl6P27784 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Ccl6P27784 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ccl6P27784 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.91■□□□□ 0.14
Ccl6P27784 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccl6P27784 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccl6P27784 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.91■□□□□ 0.14
Ccl6P27784 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccl6P27784 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccl6P27784 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccl6P27784 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ccl6P27784 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccl6P27784 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccl6P27784 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ccl6P27784 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.9■□□□□ 0.14
Ccl6P27784 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccl6P27784 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccl6P27784 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccl6P27784 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccl6P27784 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccl6P27784 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.89■□□□□ 0.13
Ccl6P27784 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccl6P27784 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.89■□□□□ 0.13
Ccl6P27784 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.89■□□□□ 0.13
Ccl6P27784 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.89■□□□□ 0.13
Ccl6P27784 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccl6P27784 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccl6P27784 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccl6P27784 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccl6P27784 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccl6P27784 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccl6P27784 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccl6P27784 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccl6P27784 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccl6P27784 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ccl6P27784 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccl6P27784 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccl6P27784 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccl6P27784 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ccl6P27784 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccl6P27784 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccl6P27784 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccl6P27784 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccl6P27784 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Ccl6P27784 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ccl6P27784 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccl6P27784 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccl6P27784 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccl6P27784 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.87■□□□□ 0.13
Ccl6P27784 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.87■□□□□ 0.13
Ccl6P27784 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccl6P27784 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccl6P27784 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.87■□□□□ 0.13
Ccl6P27784 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms