Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.53■□□□□ 0.24
Tnfrsf9P20334 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfrsf9P20334 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Tnfrsf9P20334 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfrsf9P20334 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfrsf9P20334 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfrsf9P20334 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.52■□□□□ 0.24
Tnfrsf9P20334 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfrsf9P20334 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.52■□□□□ 0.24
Tnfrsf9P20334 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Tnfrsf9P20334 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfrsf9P20334 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfrsf9P20334 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Tnfrsf9P20334 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Tnfrsf9P20334 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfrsf9P20334 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfrsf9P20334 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfrsf9P20334 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfrsf9P20334 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfrsf9P20334 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.5■□□□□ 0.23
Tnfrsf9P20334 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.5■□□□□ 0.23
Tnfrsf9P20334 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.5■□□□□ 0.23
Tnfrsf9P20334 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.5■□□□□ 0.23
Tnfrsf9P20334 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf9P20334 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf9P20334 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tnfrsf9P20334 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf9P20334 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf9P20334 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf9P20334 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf9P20334 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf9P20334 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf9P20334 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf9P20334 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf9P20334 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf9P20334 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf9P20334 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf9P20334 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf9P20334 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms