Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Golph3-205ENSMUST00000228671 2842 ntBASIC14.18□□□□□ -0.14
Smim1P0C8K7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim1P0C8K7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim1P0C8K7 Gm24970-201ENSMUST00000175582 82 ntBASIC14.17□□□□□ -0.14
Smim1P0C8K7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Smim1P0C8K7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim1P0C8K7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.17□□□□□ -0.14
Smim1P0C8K7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.17□□□□□ -0.14
Smim1P0C8K7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smim1P0C8K7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim1P0C8K7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.17□□□□□ -0.14
Smim1P0C8K7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim1P0C8K7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Gm24804-201ENSMUST00000174982 85 ntBASIC14.16□□□□□ -0.14
Smim1P0C8K7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim1P0C8K7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.15□□□□□ -0.14
Smim1P0C8K7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim1P0C8K7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smim1P0C8K7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smim1P0C8K7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smim1P0C8K7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.13□□□□□ -0.15
Smim1P0C8K7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smim1P0C8K7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim1P0C8K7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.12□□□□□ -0.15
Smim1P0C8K7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim1P0C8K7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms