Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.62■□□□□ 0.73
Sod1P08228 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sod1P08228 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Sod1P08228 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sod1P08228 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sod1P08228 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sod1P08228 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sod1P08228 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sod1P08228 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sod1P08228 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sod1P08228 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sod1P08228 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
Sod1P08228 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.61■□□□□ 0.73
Sod1P08228 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sod1P08228 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sod1P08228 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.61■□□□□ 0.73
Sod1P08228 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sod1P08228 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sod1P08228 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sod1P08228 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sod1P08228 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sod1P08228 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sod1P08228 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sod1P08228 Gm5874-201ENSMUST00000096101 508 ntBASIC19.6■□□□□ 0.73
Sod1P08228 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sod1P08228 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sod1P08228 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sod1P08228 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sod1P08228 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sod1P08228 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.59■□□□□ 0.73
Sod1P08228 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.59■□□□□ 0.73
Sod1P08228 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.59■□□□□ 0.73
Sod1P08228 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sod1P08228 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sod1P08228 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sod1P08228 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sod1P08228 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sod1P08228 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sod1P08228 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sod1P08228 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sod1P08228 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sod1P08228 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.58■□□□□ 0.72
Sod1P08228 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Sod1P08228 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sod1P08228 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.57■□□□□ 0.72
Sod1P08228 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sod1P08228 Gm26833-201ENSMUST00000180899 440 ntBASIC19.57■□□□□ 0.72
Sod1P08228 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.57■□□□□ 0.72
Sod1P08228 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sod1P08228 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sod1P08228 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sod1P08228 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sod1P08228 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Sod1P08228 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.56■□□□□ 0.72
Sod1P08228 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sod1P08228 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sod1P08228 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sod1P08228 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.56■□□□□ 0.72
Sod1P08228 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.56■□□□□ 0.72
Sod1P08228 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sod1P08228 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sod1P08228 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sod1P08228 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sod1P08228 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Sod1P08228 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sod1P08228 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sod1P08228 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sod1P08228 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sod1P08228 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sod1P08228 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sod1P08228 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sod1P08228 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sod1P08228 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.53■□□□□ 0.72
Sod1P08228 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sod1P08228 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sod1P08228 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sod1P08228 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sod1P08228 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sod1P08228 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
Sod1P08228 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.52■□□□□ 0.72
Sod1P08228 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sod1P08228 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sod1P08228 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sod1P08228 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sod1P08228 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sod1P08228 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.52■□□□□ 0.71
Sod1P08228 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sod1P08228 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.51■□□□□ 0.71
Sod1P08228 Gm43060-201ENSMUST00000200621 289 ntBASIC19.51■□□□□ 0.71
Sod1P08228 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sod1P08228 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.51■□□□□ 0.71
Sod1P08228 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms