Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxa4P06798 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.34■□□□□ 0.85
Hoxa4P06798 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.34■□□□□ 0.85
Hoxa4P06798 Golgb1-201ENSMUST00000023534 498 ntBASIC20.34■□□□□ 0.85
Hoxa4P06798 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Hoxa4P06798 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxa4P06798 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.34■□□□□ 0.85
Hoxa4P06798 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxa4P06798 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxa4P06798 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.33■□□□□ 0.85
Hoxa4P06798 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Hoxa4P06798 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxa4P06798 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxa4P06798 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxa4P06798 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.32■□□□□ 0.84
Hoxa4P06798 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa4P06798 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.32■□□□□ 0.84
Hoxa4P06798 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa4P06798 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa4P06798 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.32■□□□□ 0.84
Hoxa4P06798 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa4P06798 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa4P06798 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa4P06798 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa4P06798 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa4P06798 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.31■□□□□ 0.84
Hoxa4P06798 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.31■□□□□ 0.84
Hoxa4P06798 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxa4P06798 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxa4P06798 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxa4P06798 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxa4P06798 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxa4P06798 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hoxa4P06798 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Hoxa4P06798 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxa4P06798 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxa4P06798 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hoxa4P06798 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.3■□□□□ 0.84
Hoxa4P06798 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxa4P06798 Gm13241-201ENSMUST00000094493 780 ntBASIC20.3■□□□□ 0.84
Hoxa4P06798 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxa4P06798 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxa4P06798 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Hoxa4P06798 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa4P06798 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa4P06798 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
Hoxa4P06798 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Hoxa4P06798 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa4P06798 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.29■□□□□ 0.84
Hoxa4P06798 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Hoxa4P06798 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.29■□□□□ 0.84
Hoxa4P06798 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hoxa4P06798 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa4P06798 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa4P06798 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa4P06798 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa4P06798 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa4P06798 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa4P06798 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Hoxa4P06798 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa4P06798 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.27■□□□□ 0.84
Hoxa4P06798 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Hoxa4P06798 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.27■□□□□ 0.84
Hoxa4P06798 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa4P06798 Gm43530-201ENSMUST00000195920 274 ntBASIC20.27■□□□□ 0.84
Hoxa4P06798 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Hoxa4P06798 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa4P06798 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa4P06798 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa4P06798 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa4P06798 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.26■□□□□ 0.83
Hoxa4P06798 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Hoxa4P06798 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa4P06798 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Hoxa4P06798 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hoxa4P06798 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa4P06798 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa4P06798 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa4P06798 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa4P06798 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Hoxa4P06798 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa4P06798 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 156.7 ms