Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PdgfrbP05622 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PdgfrbP05622 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.77■□□□□ 0.92
PdgfrbP05622 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PdgfrbP05622 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PdgfrbP05622 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.77■□□□□ 0.92
PdgfrbP05622 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.77■□□□□ 0.92
PdgfrbP05622 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PdgfrbP05622 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.77■□□□□ 0.92
PdgfrbP05622 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PdgfrbP05622 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PdgfrbP05622 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PdgfrbP05622 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.76■□□□□ 0.91
PdgfrbP05622 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.76■□□□□ 0.91
PdgfrbP05622 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PdgfrbP05622 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PdgfrbP05622 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PdgfrbP05622 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PdgfrbP05622 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PdgfrbP05622 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PdgfrbP05622 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PdgfrbP05622 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PdgfrbP05622 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.75■□□□□ 0.91
PdgfrbP05622 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PdgfrbP05622 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PdgfrbP05622 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PdgfrbP05622 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PdgfrbP05622 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfrbP05622 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.74■□□□□ 0.91
PdgfrbP05622 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.74■□□□□ 0.91
PdgfrbP05622 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.74■□□□□ 0.91
PdgfrbP05622 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
PdgfrbP05622 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfrbP05622 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PdgfrbP05622 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfrbP05622 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfrbP05622 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.73■□□□□ 0.91
PdgfrbP05622 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfrbP05622 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfrbP05622 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfrbP05622 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfrbP05622 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.72■□□□□ 0.91
PdgfrbP05622 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.72■□□□□ 0.91
PdgfrbP05622 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.72■□□□□ 0.91
PdgfrbP05622 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PdgfrbP05622 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PdgfrbP05622 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PdgfrbP05622 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
PdgfrbP05622 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PdgfrbP05622 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PdgfrbP05622 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PdgfrbP05622 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PdgfrbP05622 Gm9959-201ENSMUST00000068277 390 ntBASIC20.71■□□□□ 0.91
PdgfrbP05622 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PdgfrbP05622 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfrbP05622 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfrbP05622 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfrbP05622 Etf1-202ENSMUST00000180351 108 ntBASIC20.7■□□□□ 0.9
PdgfrbP05622 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfrbP05622 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfrbP05622 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PdgfrbP05622 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfrbP05622 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfrbP05622 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.69■□□□□ 0.9
PdgfrbP05622 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
PdgfrbP05622 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PdgfrbP05622 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfrbP05622 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
PdgfrbP05622 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfrbP05622 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfrbP05622 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfrbP05622 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.68■□□□□ 0.9
PdgfrbP05622 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfrbP05622 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PdgfrbP05622 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfrbP05622 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfrbP05622 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfrbP05622 Gm7417-201ENSMUST00000192950 473 ntBASIC20.67■□□□□ 0.9
PdgfrbP05622 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfrbP05622 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfrbP05622 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfrbP05622 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfrbP05622 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfrbP05622 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfrbP05622 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfrbP05622 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.66■□□□□ 0.9
PdgfrbP05622 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfrbP05622 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfrbP05622 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PdgfrbP05622 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PdgfrbP05622 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PdgfrbP05622 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms