Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShdO88834 Rps24-207ENSMUST00000224568 714 ntBASIC21.03■□□□□ 0.96
ShdO88834 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShdO88834 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShdO88834 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.03■□□□□ 0.96
ShdO88834 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShdO88834 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.03■□□□□ 0.96
ShdO88834 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.02■□□□□ 0.96
ShdO88834 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ShdO88834 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShdO88834 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ShdO88834 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
ShdO88834 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShdO88834 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShdO88834 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.01■□□□□ 0.95
ShdO88834 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.01■□□□□ 0.95
ShdO88834 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.01■□□□□ 0.95
ShdO88834 Gm9959-201ENSMUST00000068277 390 ntBASIC21.01■□□□□ 0.95
ShdO88834 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.01■□□□□ 0.95
ShdO88834 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.01■□□□□ 0.95
ShdO88834 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ShdO88834 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShdO88834 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShdO88834 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShdO88834 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
ShdO88834 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ShdO88834 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.99■□□□□ 0.95
ShdO88834 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ShdO88834 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.99■□□□□ 0.95
ShdO88834 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.99■□□□□ 0.95
ShdO88834 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.99■□□□□ 0.95
ShdO88834 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.99■□□□□ 0.95
ShdO88834 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ShdO88834 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.99■□□□□ 0.95
ShdO88834 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ShdO88834 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.98■□□□□ 0.95
ShdO88834 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ShdO88834 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ShdO88834 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ShdO88834 Gm14117-201ENSMUST00000122417 843 ntBASIC20.98■□□□□ 0.95
ShdO88834 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ShdO88834 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ShdO88834 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ShdO88834 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.97■□□□□ 0.95
ShdO88834 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Gm45102-201ENSMUST00000207427 857 ntBASIC20.97■□□□□ 0.95
ShdO88834 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ShdO88834 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.96■□□□□ 0.95
ShdO88834 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ShdO88834 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.96■□□□□ 0.95
ShdO88834 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ShdO88834 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ShdO88834 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ShdO88834 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ShdO88834 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.95■□□□□ 0.94
ShdO88834 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.95■□□□□ 0.94
ShdO88834 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.95■□□□□ 0.94
ShdO88834 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.95■□□□□ 0.94
ShdO88834 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ShdO88834 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ShdO88834 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ShdO88834 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ShdO88834 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.94■□□□□ 0.94
ShdO88834 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ShdO88834 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ShdO88834 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ShdO88834 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ShdO88834 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ShdO88834 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ShdO88834 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ShdO88834 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ShdO88834 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ShdO88834 Etf1-202ENSMUST00000180351 108 ntBASIC20.92■□□□□ 0.94
ShdO88834 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ShdO88834 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ShdO88834 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ShdO88834 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ShdO88834 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ShdO88834 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ShdO88834 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShdO88834 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShdO88834 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.9■□□□□ 0.94
ShdO88834 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.9■□□□□ 0.94
ShdO88834 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms