Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tulp3O88413 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tulp3O88413 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tulp3O88413 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tulp3O88413 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.15■□□□□ 0.66
Tulp3O88413 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tulp3O88413 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Tulp3O88413 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tulp3O88413 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tulp3O88413 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tulp3O88413 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tulp3O88413 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tulp3O88413 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tulp3O88413 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tulp3O88413 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tulp3O88413 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.13■□□□□ 0.65
Tulp3O88413 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tulp3O88413 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tulp3O88413 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.13■□□□□ 0.65
Tulp3O88413 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Tulp3O88413 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tulp3O88413 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tulp3O88413 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tulp3O88413 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tulp3O88413 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tulp3O88413 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tulp3O88413 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tulp3O88413 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tulp3O88413 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tulp3O88413 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.11■□□□□ 0.65
Tulp3O88413 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tulp3O88413 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Tulp3O88413 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tulp3O88413 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.1■□□□□ 0.65
Tulp3O88413 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tulp3O88413 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tulp3O88413 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.1■□□□□ 0.65
Tulp3O88413 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tulp3O88413 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tulp3O88413 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tulp3O88413 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tulp3O88413 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Tulp3O88413 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tulp3O88413 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tulp3O88413 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tulp3O88413 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Tulp3O88413 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tulp3O88413 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.08■□□□□ 0.65
Tulp3O88413 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Tulp3O88413 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tulp3O88413 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tulp3O88413 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tulp3O88413 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tulp3O88413 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tulp3O88413 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.08■□□□□ 0.64
Tulp3O88413 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tulp3O88413 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tulp3O88413 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tulp3O88413 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tulp3O88413 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.07■□□□□ 0.64
Tulp3O88413 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Tulp3O88413 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tulp3O88413 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tulp3O88413 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.07■□□□□ 0.64
Tulp3O88413 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tulp3O88413 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Tulp3O88413 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tulp3O88413 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Tulp3O88413 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tulp3O88413 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tulp3O88413 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tulp3O88413 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tulp3O88413 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.05■□□□□ 0.64
Tulp3O88413 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tulp3O88413 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.05■□□□□ 0.64
Tulp3O88413 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.05■□□□□ 0.64
Tulp3O88413 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.05■□□□□ 0.64
Tulp3O88413 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tulp3O88413 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tulp3O88413 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tulp3O88413 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tulp3O88413 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms