Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col5a1O88207 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.93■□□□□ 0.62
Col5a1O88207 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col5a1O88207 Gm10493-201ENSMUST00000097270 612 ntBASIC18.93■□□□□ 0.62
Col5a1O88207 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col5a1O88207 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.92■□□□□ 0.62
Col5a1O88207 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.92■□□□□ 0.62
Col5a1O88207 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col5a1O88207 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col5a1O88207 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col5a1O88207 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col5a1O88207 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col5a1O88207 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col5a1O88207 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.91■□□□□ 0.62
Col5a1O88207 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col5a1O88207 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col5a1O88207 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col5a1O88207 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col5a1O88207 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Col5a1O88207 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.9■□□□□ 0.62
Col5a1O88207 Gm9870-201ENSMUST00000063874 645 ntBASIC18.9■□□□□ 0.62
Col5a1O88207 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col5a1O88207 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col5a1O88207 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col5a1O88207 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col5a1O88207 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.9■□□□□ 0.62
Col5a1O88207 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col5a1O88207 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col5a1O88207 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col5a1O88207 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.89■□□□□ 0.61
Col5a1O88207 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col5a1O88207 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col5a1O88207 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col5a1O88207 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Col5a1O88207 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.88■□□□□ 0.61
Col5a1O88207 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.88■□□□□ 0.61
Col5a1O88207 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.88■□□□□ 0.61
Col5a1O88207 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col5a1O88207 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col5a1O88207 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col5a1O88207 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col5a1O88207 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col5a1O88207 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col5a1O88207 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.88■□□□□ 0.61
Col5a1O88207 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.88■□□□□ 0.61
Col5a1O88207 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col5a1O88207 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col5a1O88207 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col5a1O88207 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col5a1O88207 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col5a1O88207 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col5a1O88207 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col5a1O88207 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col5a1O88207 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.87■□□□□ 0.61
Col5a1O88207 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.87■□□□□ 0.61
Col5a1O88207 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.87■□□□□ 0.61
Col5a1O88207 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Col5a1O88207 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col5a1O88207 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col5a1O88207 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col5a1O88207 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col5a1O88207 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col5a1O88207 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col5a1O88207 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col5a1O88207 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.86■□□□□ 0.61
Col5a1O88207 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.86■□□□□ 0.61
Col5a1O88207 Gm7143-201ENSMUST00000222811 859 ntBASIC18.86■□□□□ 0.61
Col5a1O88207 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col5a1O88207 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col5a1O88207 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col5a1O88207 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col5a1O88207 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col5a1O88207 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col5a1O88207 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.85■□□□□ 0.61
Col5a1O88207 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Col5a1O88207 Spcs1-204ENSMUST00000226782 949 ntBASIC18.85■□□□□ 0.61
Col5a1O88207 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col5a1O88207 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col5a1O88207 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.85■□□□□ 0.61
Col5a1O88207 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.85■□□□□ 0.61
Col5a1O88207 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col5a1O88207 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.84■□□□□ 0.61
Col5a1O88207 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Col5a1O88207 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col5a1O88207 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col5a1O88207 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col5a1O88207 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Col5a1O88207 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.83■□□□□ 0.6
Col5a1O88207 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col5a1O88207 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.83■□□□□ 0.6
Col5a1O88207 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.83■□□□□ 0.6
Col5a1O88207 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col5a1O88207 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col5a1O88207 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col5a1O88207 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col5a1O88207 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col5a1O88207 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col5a1O88207 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col5a1O88207 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col5a1O88207 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms