Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim3O70209 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim3O70209 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pdlim3O70209 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.61■□□□□ 0.57
Pdlim3O70209 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pdlim3O70209 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim3O70209 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pdlim3O70209 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pdlim3O70209 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pdlim3O70209 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim3O70209 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pdlim3O70209 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim3O70209 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim3O70209 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim3O70209 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.6■□□□□ 0.57
Pdlim3O70209 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Gm27502-201ENSMUST00000183495 199 ntBASIC18.6■□□□□ 0.57
Pdlim3O70209 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.6■□□□□ 0.57
Pdlim3O70209 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.6■□□□□ 0.57
Pdlim3O70209 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim3O70209 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim3O70209 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim3O70209 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim3O70209 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim3O70209 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim3O70209 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.58■□□□□ 0.57
Pdlim3O70209 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.58■□□□□ 0.57
Pdlim3O70209 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim3O70209 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim3O70209 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim3O70209 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim3O70209 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.58■□□□□ 0.56
Pdlim3O70209 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim3O70209 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim3O70209 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pdlim3O70209 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim3O70209 Gm14523-201ENSMUST00000117260 558 ntBASIC18.57■□□□□ 0.56
Pdlim3O70209 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim3O70209 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim3O70209 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim3O70209 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim3O70209 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.55■□□□□ 0.56
Pdlim3O70209 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.55■□□□□ 0.56
Pdlim3O70209 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.55■□□□□ 0.56
Pdlim3O70209 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim3O70209 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.54■□□□□ 0.56
Pdlim3O70209 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pdlim3O70209 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.54■□□□□ 0.56
Pdlim3O70209 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim3O70209 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.54■□□□□ 0.56
Pdlim3O70209 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pdlim3O70209 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pdlim3O70209 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.53■□□□□ 0.56
Pdlim3O70209 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.53■□□□□ 0.56
Pdlim3O70209 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
Pdlim3O70209 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim3O70209 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pdlim3O70209 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim3O70209 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim3O70209 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim3O70209 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim3O70209 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim3O70209 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.52■□□□□ 0.56
Pdlim3O70209 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim3O70209 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim3O70209 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim3O70209 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms