Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DffbO54788 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DffbO54788 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
DffbO54788 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DffbO54788 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DffbO54788 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.54■□□□□ 0.4
DffbO54788 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.54■□□□□ 0.4
DffbO54788 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DffbO54788 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DffbO54788 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DffbO54788 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.53■□□□□ 0.4
DffbO54788 Gm12366-201ENSMUST00000121722 873 ntBASIC17.53■□□□□ 0.4
DffbO54788 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.53■□□□□ 0.4
DffbO54788 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DffbO54788 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DffbO54788 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.53■□□□□ 0.4
DffbO54788 Gm5786-201ENSMUST00000085368 882 ntBASIC17.53■□□□□ 0.4
DffbO54788 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DffbO54788 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DffbO54788 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DffbO54788 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DffbO54788 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.52■□□□□ 0.4
DffbO54788 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.52■□□□□ 0.4
DffbO54788 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DffbO54788 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DffbO54788 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DffbO54788 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DffbO54788 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DffbO54788 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DffbO54788 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DffbO54788 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DffbO54788 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DffbO54788 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DffbO54788 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
DffbO54788 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.51■□□□□ 0.39
DffbO54788 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.51■□□□□ 0.39
DffbO54788 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
DffbO54788 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
DffbO54788 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DffbO54788 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DffbO54788 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DffbO54788 Gm10420-201ENSMUST00000121713 882 ntBASIC17.5■□□□□ 0.39
DffbO54788 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DffbO54788 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DffbO54788 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DffbO54788 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DffbO54788 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DffbO54788 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.49■□□□□ 0.39
DffbO54788 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
DffbO54788 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.49■□□□□ 0.39
DffbO54788 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
DffbO54788 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DffbO54788 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.49■□□□□ 0.39
DffbO54788 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DffbO54788 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DffbO54788 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DffbO54788 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DffbO54788 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.48■□□□□ 0.39
DffbO54788 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
DffbO54788 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DffbO54788 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DffbO54788 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DffbO54788 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DffbO54788 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DffbO54788 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DffbO54788 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Mir6538-201ENSMUST00000183713 110 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms