Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ptch2O35595 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ptch2O35595 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ptch2O35595 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ptch2O35595 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptch2O35595 Mir7075-201ENSMUST00000184187 82 ntBASIC21.07■□□□□ 0.96
Ptch2O35595 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ptch2O35595 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptch2O35595 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ptch2O35595 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ptch2O35595 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Ptch2O35595 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ptch2O35595 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ptch2O35595 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptch2O35595 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ptch2O35595 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ptch2O35595 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptch2O35595 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptch2O35595 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ptch2O35595 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptch2O35595 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptch2O35595 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ptch2O35595 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptch2O35595 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ptch2O35595 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptch2O35595 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptch2O35595 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.05■□□□□ 0.96
Ptch2O35595 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ptch2O35595 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ptch2O35595 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Ptch2O35595 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ptch2O35595 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Ptch2O35595 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.04■□□□□ 0.96
Ptch2O35595 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ptch2O35595 Gm43017-201ENSMUST00000198296 752 ntBASIC21.04■□□□□ 0.96
Ptch2O35595 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ptch2O35595 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ptch2O35595 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ptch2O35595 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Ptch2O35595 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.03■□□□□ 0.96
Ptch2O35595 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ptch2O35595 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ptch2O35595 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.03■□□□□ 0.96
Ptch2O35595 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.03■□□□□ 0.96
Ptch2O35595 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ptch2O35595 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.02■□□□□ 0.96
Ptch2O35595 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ptch2O35595 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ptch2O35595 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ptch2O35595 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptch2O35595 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ptch2O35595 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.01■□□□□ 0.95
Ptch2O35595 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptch2O35595 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptch2O35595 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ptch2O35595 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptch2O35595 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ptch2O35595 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptch2O35595 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptch2O35595 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptch2O35595 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptch2O35595 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ptch2O35595 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Ptch2O35595 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ptch2O35595 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ptch2O35595 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ptch2O35595 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ptch2O35595 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ptch2O35595 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ptch2O35595 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptch2O35595 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptch2O35595 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ptch2O35595 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.98■□□□□ 0.95
Ptch2O35595 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ptch2O35595 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptch2O35595 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ptch2O35595 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptch2O35595 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptch2O35595 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptch2O35595 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ptch2O35595 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ptch2O35595 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms