Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ebf3O08791 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ebf3O08791 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.3■■□□□ 1
Ebf3O08791 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ebf3O08791 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
Ebf3O08791 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ebf3O08791 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ebf3O08791 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ebf3O08791 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ebf3O08791 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ebf3O08791 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ebf3O08791 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ebf3O08791 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ebf3O08791 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ebf3O08791 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ebf3O08791 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.28■■□□□ 1
Ebf3O08791 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ebf3O08791 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ebf3O08791 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
Ebf3O08791 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ebf3O08791 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ebf3O08791 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ebf3O08791 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ebf3O08791 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ebf3O08791 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ebf3O08791 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ebf3O08791 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ebf3O08791 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ebf3O08791 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.27■■□□□ 1
Ebf3O08791 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ebf3O08791 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Ebf3O08791 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ebf3O08791 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.26■□□□□ 0.99
Ebf3O08791 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ebf3O08791 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ebf3O08791 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ebf3O08791 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ebf3O08791 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ebf3O08791 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.24■□□□□ 0.99
Ebf3O08791 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ebf3O08791 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ebf3O08791 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ebf3O08791 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Ebf3O08791 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Ebf3O08791 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ebf3O08791 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ebf3O08791 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Ebf3O08791 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Ebf3O08791 Gm43137-201ENSMUST00000198052 594 ntBASIC21.23■□□□□ 0.99
Ebf3O08791 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ebf3O08791 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ebf3O08791 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.23■□□□□ 0.99
Ebf3O08791 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ebf3O08791 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ebf3O08791 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ebf3O08791 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ebf3O08791 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ebf3O08791 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.22■□□□□ 0.99
Ebf3O08791 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ebf3O08791 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ebf3O08791 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ebf3O08791 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ebf3O08791 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.22■□□□□ 0.99
Ebf3O08791 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ebf3O08791 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Ebf3O08791 Gm6139-201ENSMUST00000079261 882 ntBASIC21.22■□□□□ 0.99
Ebf3O08791 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ebf3O08791 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.22■□□□□ 0.99
Ebf3O08791 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ebf3O08791 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ebf3O08791 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ebf3O08791 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ebf3O08791 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ebf3O08791 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Ebf3O08791 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ebf3O08791 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.21■□□□□ 0.99
Ebf3O08791 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ebf3O08791 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ebf3O08791 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ebf3O08791 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ebf3O08791 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ebf3O08791 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.2■□□□□ 0.98
Ebf3O08791 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.2■□□□□ 0.98
Ebf3O08791 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ebf3O08791 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ebf3O08791 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ebf3O08791 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ebf3O08791 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ebf3O08791 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ebf3O08791 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ebf3O08791 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ebf3O08791 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ebf3O08791 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ebf3O08791 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ebf3O08791 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.19■□□□□ 0.98
Ebf3O08791 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Ebf3O08791 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.18■□□□□ 0.98
Ebf3O08791 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ebf3O08791 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ebf3O08791 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms