Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raph1F2Z3U3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.36■□□□□ 0.85
Raph1F2Z3U3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.35■□□□□ 0.85
Raph1F2Z3U3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Raph1F2Z3U3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raph1F2Z3U3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raph1F2Z3U3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raph1F2Z3U3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Scarna2-201ENSMUST00000157560 414 ntBASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Raph1F2Z3U3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raph1F2Z3U3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raph1F2Z3U3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.33■□□□□ 0.85
Raph1F2Z3U3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.33■□□□□ 0.85
Raph1F2Z3U3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.33■□□□□ 0.85
Raph1F2Z3U3 Gm16437-201ENSMUST00000025669 507 ntBASIC20.33■□□□□ 0.85
Raph1F2Z3U3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Raph1F2Z3U3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raph1F2Z3U3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Raph1F2Z3U3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raph1F2Z3U3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raph1F2Z3U3 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.33■□□□□ 0.84
Raph1F2Z3U3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raph1F2Z3U3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raph1F2Z3U3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Gm9806-201ENSMUST00000051080 552 ntBASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raph1F2Z3U3 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.3■□□□□ 0.84
Raph1F2Z3U3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raph1F2Z3U3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raph1F2Z3U3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raph1F2Z3U3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raph1F2Z3U3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.3■□□□□ 0.84
Raph1F2Z3U3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raph1F2Z3U3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Raph1F2Z3U3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raph1F2Z3U3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Raph1F2Z3U3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raph1F2Z3U3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raph1F2Z3U3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raph1F2Z3U3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raph1F2Z3U3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raph1F2Z3U3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Raph1F2Z3U3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Raph1F2Z3U3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Raph1F2Z3U3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raph1F2Z3U3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raph1F2Z3U3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raph1F2Z3U3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.27■□□□□ 0.84
Raph1F2Z3U3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Raph1F2Z3U3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Raph1F2Z3U3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.27■□□□□ 0.83
Raph1F2Z3U3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raph1F2Z3U3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raph1F2Z3U3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raph1F2Z3U3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raph1F2Z3U3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Raph1F2Z3U3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.26■□□□□ 0.83
Raph1F2Z3U3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms