Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Mmp27D3YV89 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Mmp27D3YV89 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
Mmp27D3YV89 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Mmp27D3YV89 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.19■□□□□ 0.34
Mmp27D3YV89 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp27D3YV89 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Mmp27D3YV89 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Gm5921-201ENSMUST00000075898 882 ntBASIC17.18■□□□□ 0.34
Mmp27D3YV89 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp27D3YV89 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp27D3YV89 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp27D3YV89 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp27D3YV89 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp27D3YV89 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp27D3YV89 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.16■□□□□ 0.34
Mmp27D3YV89 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp27D3YV89 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Mmp27D3YV89 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp27D3YV89 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp27D3YV89 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.16■□□□□ 0.34
Mmp27D3YV89 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp27D3YV89 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mmp27D3YV89 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp27D3YV89 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp27D3YV89 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp27D3YV89 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp27D3YV89 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp27D3YV89 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Mmp27D3YV89 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.14■□□□□ 0.34
Mmp27D3YV89 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mmp27D3YV89 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Mmp27D3YV89 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp27D3YV89 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp27D3YV89 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp27D3YV89 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp27D3YV89 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp27D3YV89 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp27D3YV89 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp27D3YV89 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp27D3YV89 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.12■□□□□ 0.33
Mmp27D3YV89 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp27D3YV89 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms