Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ubr4A2AN08 Mir5133-201ENSMUST00000174955 77 ntBASIC11.19□□□□□ -0.62
Ubr4A2AN08 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Ubr4A2AN08 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ubr4A2AN08 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.19□□□□□ -0.62
Ubr4A2AN08 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ubr4A2AN08 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ubr4A2AN08 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ubr4A2AN08 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.19□□□□□ -0.62
Ubr4A2AN08 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ubr4A2AN08 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.19□□□□□ -0.62
Ubr4A2AN08 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Ubr4A2AN08 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.18□□□□□ -0.62
Ubr4A2AN08 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.18□□□□□ -0.62
Ubr4A2AN08 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ubr4A2AN08 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.17□□□□□ -0.62
Ubr4A2AN08 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.17□□□□□ -0.62
Ubr4A2AN08 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Gm715-201ENSMUST00000117865 831 ntBASIC11.16□□□□□ -0.62
Ubr4A2AN08 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ubr4A2AN08 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubr4A2AN08 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubr4A2AN08 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC11.15□□□□□ -0.62
Ubr4A2AN08 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubr4A2AN08 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC11.15□□□□□ -0.63
Ubr4A2AN08 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.15□□□□□ -0.63
Ubr4A2AN08 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ubr4A2AN08 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubr4A2AN08 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubr4A2AN08 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubr4A2AN08 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubr4A2AN08 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.14□□□□□ -0.63
Ubr4A2AN08 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.14□□□□□ -0.63
Ubr4A2AN08 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubr4A2AN08 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubr4A2AN08 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Ubr4A2AN08 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubr4A2AN08 AC117245.4-201ENSMUST00000217388 1646 ntBASIC11.14□□□□□ -0.63
Ubr4A2AN08 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ubr4A2AN08 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC11.13□□□□□ -0.63
Ubr4A2AN08 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.13□□□□□ -0.63
Ubr4A2AN08 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms