Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc9a6A1L3P4 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Slc9a6A1L3P4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Slc9a6A1L3P4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc9a6A1L3P4 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.24■□□□□ 0.67
Slc9a6A1L3P4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.24■□□□□ 0.67
Slc9a6A1L3P4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc9a6A1L3P4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Slc9a6A1L3P4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc9a6A1L3P4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc9a6A1L3P4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc9a6A1L3P4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc9a6A1L3P4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc9a6A1L3P4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Gm15820-201ENSMUST00000201566 728 ntBASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc9a6A1L3P4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc9a6A1L3P4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc9a6A1L3P4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms