Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.09■□□□□ 0.33
Lnp1A0A1B0GSK3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lnp1A0A1B0GSK3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lnp1A0A1B0GSK3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lnp1A0A1B0GSK3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lnp1A0A1B0GSK3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lnp1A0A1B0GSK3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lnp1A0A1B0GSK3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Lnp1A0A1B0GSK3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.08■□□□□ 0.33
Lnp1A0A1B0GSK3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lnp1A0A1B0GSK3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lnp1A0A1B0GSK3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Lnp1A0A1B0GSK3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Lnp1A0A1B0GSK3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.07■□□□□ 0.32
Lnp1A0A1B0GSK3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Lnp1A0A1B0GSK3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.07■□□□□ 0.32
Lnp1A0A1B0GSK3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Gm10399-202ENSMUST00000202768 748 ntBASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lnp1A0A1B0GSK3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lnp1A0A1B0GSK3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lnp1A0A1B0GSK3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lnp1A0A1B0GSK3 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.05■□□□□ 0.32
Lnp1A0A1B0GSK3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lnp1A0A1B0GSK3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Gm15546-201ENSMUST00000122095 826 ntBASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lnp1A0A1B0GSK3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lnp1A0A1B0GSK3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lnp1A0A1B0GSK3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Lnp1A0A1B0GSK3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lnp1A0A1B0GSK3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.02■□□□□ 0.31
Lnp1A0A1B0GSK3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Lnp1A0A1B0GSK3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Lnp1A0A1B0GSK3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.02■□□□□ 0.31
Lnp1A0A1B0GSK3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lnp1A0A1B0GSK3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lnp1A0A1B0GSK3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lnp1A0A1B0GSK3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lnp1A0A1B0GSK3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lnp1A0A1B0GSK3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms