Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Gm11175-201ENSMUST00000116172 543 ntBASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv29A0A0G2LB96 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv29A0A0G2LB96 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv29A0A0G2LB96 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv29A0A0G2LB96 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.04■□□□□ 0.32
Trbv29A0A0G2LB96 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv29A0A0G2LB96 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trbv29A0A0G2LB96 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv29A0A0G2LB96 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trbv29A0A0G2LB96 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Trbv29A0A0G2LB96 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv29A0A0G2LB96 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv29A0A0G2LB96 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv29A0A0G2LB96 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv29A0A0G2LB96 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv29A0A0G2LB96 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.03■□□□□ 0.32
Trbv29A0A0G2LB96 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trbv29A0A0G2LB96 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv29A0A0G2LB96 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv29A0A0G2LB96 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv29A0A0G2LB96 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.02■□□□□ 0.31
Trbv29A0A0G2LB96 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv29A0A0G2LB96 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Gm28536-201ENSMUST00000190971 1317 ntBASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Gm10420-201ENSMUST00000121713 882 ntBASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv29A0A0G2LB96 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv29A0A0G2LB96 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms